Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E14
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    29   5.1  
Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    28   9.0  

>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/49 (34%), Positives = 17/49 (34%)
 Frame = -3

Query: 627 GAXGGXXGGXRXXGRNPXXREXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           G  GG  GG    G        G  G     G  GGG   G    RGGG
Sbjct: 83  GNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131



 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/46 (34%), Positives = 16/46 (34%)
 Frame = -3

Query: 618 GGXXGGXRXXGRNPXXREXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           GG  GG R  G        G  G     G  GGG   G     GGG
Sbjct: 87  GGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/46 (34%), Positives = 17/46 (36%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPP 619
           PPPR  +     PPP  P        P S      P  R PP  PP
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPPRS------PPPRRPPMTPP 165


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
 Frame = -3

Query: 627 GAXGGXXGGXRXXGRNPXXR-EXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           G  GG  GG    GR    R   G  G     G  GGG   G     GGG
Sbjct: 127 GNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176



 Score = 28.3 bits (60), Expect = 6.8
 Identities = 27/107 (25%), Positives = 29/107 (27%), Gaps = 1/107 (0%)
 Frame = -2

Query: 772 NWGXXGLXRXXLXXXXGDGXXGRXXXXRPDXAG-NGPXGXDXEXXGXXXXGXXGXXXGAP 596
           NWG  G  R       G+G  GR    R D  G N   G +    G    G  G   G  
Sbjct: 77  NWGGNGGGRGD---WGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGG 133

Query: 595 XXRTXPXXXGXXXARXXXRXWGXWXRXPXRXLXGSGXRXXXXXXGXG 455
             R      G           G W         G G R      G G
Sbjct: 134 GGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAG 180


>Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical
           protein T01C3.7 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = -3

Query: 627 GAXGGXXGGXRXXGRNPXXREXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           G+ GG  GG R           G        G  GGG   G    RGGG
Sbjct: 25  GSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGG 73


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/49 (32%), Positives = 16/49 (32%)
 Frame = -3

Query: 627 GAXGGXXGGXRXXGRNPXXREXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           G  GG  GG       P     G  G     G  GGG   G     GGG
Sbjct: 60  GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/49 (32%), Positives = 16/49 (32%)
 Frame = -3

Query: 627 GAXGGXXGGXRXXGRNPXXREXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           G  GG  GG       P     G  G     G  GGG   G     GGG
Sbjct: 60  GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/49 (32%), Positives = 16/49 (32%)
 Frame = -3

Query: 627 GAXGGXXGGXRXXGRNPXXREXGXXGXXXXXGXXGGGXPXGXXXARGGG 481
           G  GG  GG    G        G  G     G  GGG   G     GGG
Sbjct: 138 GGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGG 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,114,288
Number of Sequences: 27780
Number of extensions: 102976
Number of successful extensions: 444
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)