Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E13
         (721 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241...    29   2.8  
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208...    29   4.9  
01_05_0698 + 24376193-24376708                                         29   4.9  
08_02_0964 - 23070624-23070860,23070970-23071250,23071353-23072124     28   6.5  
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583...    28   8.6  
12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192           28   8.6  
03_03_0163 - 14971398-14971562,14971638-14971664                       28   8.6  

>10_08_0765 - 20421813-20423174,20423591-20423771,20423862-20424117,
            20424768-20425095,20425218-20426156,20427015-20427761,
            20428517-20428789
          Length = 1361

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -2

Query: 270  PCSRCASPIP*ETWTEGTPKMKTSRDEHSNKKKKKKRPLYTFYQPVSRASPTCHERFLPR 91
            PC R +S I   T+  G P+++ S ++H       ++  Y  +    R  PT H R    
Sbjct: 1079 PCRRNSSQIRPNTYEAGAPELQ-SMNKHREFSSYPQQAPYRTFGGRGRGRPTYHGRGRGG 1137

Query: 90   YYIKT 76
            +Y +T
Sbjct: 1138 WYERT 1142


>03_01_0270 -
           2085461-2086205,2086260-2086339,2086598-2086690,
           2086774-2086881,2087012-2087101,2087234-2087275,
           2087516-2087587,2090848-2090985,2091074-2092624
          Length = 972

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 254 PRQFHKKHGQKVRLK*RHHEMNIRIKKKKKNDHF 153
           PR F +K G+K   K  H E   + ++    DH+
Sbjct: 273 PRHFDRKDGRKENAKLHHEEPRSKRRRSTSRDHY 306


>01_05_0698 + 24376193-24376708
          Length = 171

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 319 PIAGVALGVACVEVVGALFALCLANSIRNMDRRYA 215
           P+AGV +  A V  V ALF  CLA  +R+ +   A
Sbjct: 126 PVAGVLVMGADVAGVSALFGFCLAEYLRHNEAHAA 160


>08_02_0964 - 23070624-23070860,23070970-23071250,23071353-23072124
          Length = 429

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -1

Query: 283 EVVGALFA-LCLANSIRNMDRRYA 215
           E+ GA+FA +C  NS++N+D R++
Sbjct: 334 EIHGAMFAAMCQKNSLKNLDSRFS 357


>12_02_0133 -
           14057469-14057497,14057516-14057581,14057770-14058363,
           14058450-14058570,14058926-14059320,14059410-14059534,
           14059646-14059876,14060012-14060484,14060587-14060693,
           14060842-14061172,14061222-14061250,14061345-14061901,
           14062170-14062255,14062344-14062406,14062646-14063001,
           14063101-14063356
          Length = 1272

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 191 SSRDVFILGVPSVHVSYGIGEAQREQG-SYHLNTSNTESN 307
           S RD  ILG PSV  S     + +E+  + HL T  +E N
Sbjct: 526 SDRDTSILGCPSVTASMTTQVSSKEESKAQHLTTGYSEVN 565


>12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192
          Length = 283

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -1

Query: 412 LXTXAGNXCTVDAANPGCGPKI--GEXYQKWNKPIAGVALGVACVEVVGALF 263
           L T AG  C +    P CGP+   G   Q+W       + G   VE++GALF
Sbjct: 111 LSTGAG--CAI-RPRPRCGPRARSGVAAQQWRHGRTVASEGRQSVELIGALF 159


>03_03_0163 - 14971398-14971562,14971638-14971664
          Length = 63

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 213 KMKTSRDEHSNKKKKKKRPLYTFYQPVSRASPTC 112
           K K  + +   KKKKKK   +  Y  + R S  C
Sbjct: 21  KKKKKKKKKKKKKKKKKHACFDLYPTILRPSHPC 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,269,542
Number of Sequences: 37544
Number of extensions: 224804
Number of successful extensions: 712
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)