Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E13
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    45   8e-07
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           25   0.72 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.2  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   3.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.7  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   8.9  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.9  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 427 VKKSILXTXAGNXCTV-DAANPGCGPKIGEXYQKWNKPIAGVALGVACVEVVGALFALCL 251
           +  S   +   N C++ ++   GC   + +  +        VA+ +A VE++G + ALCL
Sbjct: 159 IPASCCNSPENNTCSISNSYTNGCVEALKDTVKLAGTVFGSVAIAIAIVELIGIICALCL 218

Query: 250 ANSIRNMDRR 221
           ANSI+N +RR
Sbjct: 219 ANSIKNAERR 228


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 231 WTEGTPKMKTSRDEHSNKKKKKKRP 157
           W +G P   T+  +HS  K  K RP
Sbjct: 206 WKDGIPVTLTTVPKHSKTKSPKLRP 230


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 213 KMKTSRDEHSNKKKKKK 163
           K K S +EH NKKKK K
Sbjct: 202 KSKAS-EEHGNKKKKNK 217


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 120 PTCHERFLPRYYIKT 76
           P CH+RF   +++KT
Sbjct: 13  PECHKRFTRDHHLKT 27


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 331 KWNKPIAGVALGVACVEVVGALFALCL 251
           +WN   A     ++C+ +V  +   CL
Sbjct: 510 RWNSAFAIAPAVISCLGIVATMAVACL 536


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 331 KWNKPIAGVALGVACVEVVGALFALCL 251
           +WN   A     ++C+ +V  +   CL
Sbjct: 600 RWNSAFAIAPAVISCLGIVATMAVACL 626


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
          protein.
          Length = 90

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 20 INLPFCGP 43
          I LPFCGP
Sbjct: 24 IQLPFCGP 31


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = -2

Query: 216 PKMKTSRDEHSNKKKKKKRPLYTFYQPVSRAS 121
           P+      + S ++++++ P Y     + RAS
Sbjct: 396 PRQTPPSRKESGRRRRRRTPRYNSVSKIDRAS 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,551
Number of Sequences: 438
Number of extensions: 2027
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)