Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_E11
(1205 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 7e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.98
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 29 0.98
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.3
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 3.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 9.1
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 9.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.2 bits (97), Expect = 7e-05
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -3
Query: 888 PPPPXGGGXXXPPPPPXXXGGXPPPPP 808
PP P GG PPPPP G PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 39.9 bits (89), Expect = 7e-04
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 887 PPPPXGGGXXXPPPPXXXXGGXPPPPP 807
PP P GG PPPP G PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXGGAPPPPP 806
P P GG PPPPP G PPPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 34.7 bits (76), Expect = 0.026
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -2
Query: 904 GGEXXXPPPPGGGXXXPPPPPXXXXGGAPPPP 809
GG PPPPG PPPPP PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP-------PPPP 783
Score = 34.3 bits (75), Expect = 0.034
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXGGAPPPPP 806
PPP PPPPP GA PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Frame = -2
Query: 886 PPPPG------GGXXXPPPPPXXXXGGAPPPPP 806
PPPP P PPP GG PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 885 PPPXGGGXXXPPPPPXXXGGXPPPPP 808
P P PPP P G PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.3 bits (65), Expect = 0.56
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 636 PXPXXXXXXXPPPPPXXXXPPXFXFKXPPPPP 731
P P PPPPP PP PPPPP
Sbjct: 752 PPPAPIMGGPPPPPP----PPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 636 PXPXXXXXXXPPPPPXXXXPPXFXFKXPPPPP 731
P P P P P PP PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 883 PPPGGGXXXPPPPPXXXXGGAPPPPP 806
P P PPP G PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.2 bits (55), Expect(2) = 1.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 666 PPPPPXXXXPPXFXFKXPPPPP 731
PPPPP P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPP 754
Score = 23.0 bits (47), Expect(2) = 7.8
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 667 PPPPXXXXXPXXFXLNXPPPPP 732
PPPP P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPP 754
Score = 21.4 bits (43), Expect(2) = 7.8
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 826 PPXXXXGGGGXXXPPPXGGGG 888
PP GG PPP G G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAG 772
Score = 21.0 bits (42), Expect(2) = 1.3
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 825 PPXXXXGGGGGXXXPPPGGGG 887
PP GG PPPG G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAG 772
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.10
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 877 PGGGXXXPPPPPXXXXGGAPPPPP 806
P G PPPPP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 31.9 bits (69), Expect = 0.18
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 880 PPGGGXXXPPPPPXXXXGGAPPPPP 806
PPG PPPP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.74
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 666 PPPPPXXXXPPXFXFKXPPPPP 731
PPPPP PP + PPPPP
Sbjct: 11 PPPPPPGFEPPS---QPPPPPP 29
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 666 PPPPPXXXXPPXFXFKXPPPPP 731
PPPPP PP F PPPP
Sbjct: 9 PPPPPP---PPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 882 PPXGGGXXXPPPPPXXX--GGXPPPPP 808
PP G PPPPP PPPPP
Sbjct: 5 PP--GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 904 GGEXXXPPPPGGGXXXPPPPP 842
G PPPPG PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 888 PPPPXGGGXXXPPPPPXXXG 829
PPPP G PPPP G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.14
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 888 PPPPXGGGXXXPPPPPXXXGGXPPPPP 808
PPPP P PP PPPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.9 bits (64), Expect = 0.74
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXGGAPPPPP 806
P PP G PPPPP PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -1
Query: 887 PPPPXGGGXXXPPPPXXXXGGXPPPPP 807
PPPP P P PPPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = -2
Query: 916 GGGGGGEXXXPPPPGGGXXXPPPPPXXXXG-GAPPPPP 806
G G PPPP P G APPPPP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 888 PPPPXGGGXXXPPPPPXXXGGXPPPPP 808
P PP G PPPP PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXGGAPPPPP 806
PP P G PP PP APPP P
Sbjct: 457 PPLPAGMPAAPPLPPA---APAPPPAP 480
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 901 GEXXXPPPPGG--GXXXPPPPPXXXXGGAPPPPP 806
GE PPP G PPPP G PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 910 GGGGEXXXPPPPGGGXXXPPPPPXXXXGGAPPPP 809
G GG PPPP G P P GAP P
Sbjct: 282 GPGGAPLVPPPPPGMVMASPSPAAATIPGAPVMP 315
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXGGAPP 815
P PGG PPPPP P
Sbjct: 280 PMGPGGAPLVPPPPPGMVMASPSP 303
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXG--GAPPPP 809
PPPP PP P G APPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 886 PPPPGGGXXXPPPPPXXXXGGAPPPPP 806
PPPP P PP + PPPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 666 PPPPPXXXXPPXFXFKXPPPPP 731
PP P PP PPPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPP 1711
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 888 PPPPXGGGXXXPPPPPXXXGGXPPPPP 808
PPPP P PP G PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 882 PPXGGGXXXPPPPPXXXGGXPPP 814
P G G PPPP G PPP
Sbjct: 120 PVRGVGYTAPPPPAGFGRGAPPP 142
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 881 PPXGGGXXXPPPPXXXXGGXPPP 813
P G G PPPP G PPP
Sbjct: 120 PVRGVGYTAPPPPAGFGRGAPPP 142
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 916 GGGGGGEXXXPPPPGG 869
GG GGG PP PGG
Sbjct: 191 GGFGGGSGGPPPGPGG 206
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 843 GGGGGXXXPPPGGGG 887
G GGG PPPG GG
Sbjct: 192 GFGGGSGGPPPGPGG 206
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 809 GGGGGXPPXXXGGGGG 856
GGG G PP GG GG
Sbjct: 194 GGGSGGPPPGPGGFGG 209
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = -2
Query: 886 PPPPGGGXXXPP--PPPXXXXGGAPPPP 809
PPPP PP PPP AP P
Sbjct: 48 PPPPSVDHSAPPSGPPPSYSNSAAPATP 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,146,974
Number of Sequences: 5004
Number of extensions: 31824
Number of successful extensions: 430
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 651443514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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