Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E10
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.    29   2.5  
AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical...    28   5.7  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    28   7.5  

>Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical
           protein C02C6.1b protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +2

Query: 488 PXGGEKXXXPXGXXPPPX-PLXGGGKXPP 571
           P GG     P G  PPP  P  GGG  PP
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811


>AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +2

Query: 488 PXGGEKXXXPXGXXPPPX-PLXGGGKXPP 571
           P GG     P G  PPP  P  GGG  PP
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811


>AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical
           protein Y73F8A.21 protein.
          Length = 703

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 54  RSTTLLYRAQHPARNGSRLQTIPSPRHRTELXPDLRNRDA 173
           R  T+   ++ PAR   RL   P+  + TE+  DLRN  A
Sbjct: 475 RQATIDEDSEEPARQNFRLLQPPNNFYITEMLDDLRNNHA 514


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 515 PXGXXPPPXPLXGGGKXPP 571
           P    PPP P  GGG  PP
Sbjct: 37  PPACAPPPAPACGGGAPPP 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,945,331
Number of Sequences: 27780
Number of extensions: 205255
Number of successful extensions: 497
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)