Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E09
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04564-1|AAA60151.1|  285|Homo sapiens SNRPB protein.                  33   1.2  
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini...    30   8.6  
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini...    30   8.6  
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini...    30   8.6  
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini...    30   8.6  
AL445209-3|CAI15184.1|  419|Homo sapiens POU domain, class 4, tr...    30   8.6  
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr...    30   8.6  
AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.     30   8.6  

>J04564-1|AAA60151.1|  285|Homo sapiens SNRPB protein.
          Length = 285

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 19/56 (33%), Positives = 19/56 (33%)
 Frame = +1

Query: 403 PPGGGFXPPXPXGGGXXKXXXXGGXPXXXXXFFXXXXPPXGGXKXXXXXGXXPPPP 570
           PPG G  PP P G G       G  P           PP  G       G  PPPP
Sbjct: 169 PPGLG--PPPPMGRGAPPPGMMGPPPGMRPPMGPMGIPPGRGTPMGMPSGMRPPPP 222


>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 479 GXPPXXXXFXXPPPXGXGGXKPPPGGXXXP 390
           G PP    F  PPP G  G  PP G    P
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRP 918


>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 479 GXPPXXXXFXXPPPXGXGGXKPPPGGXXXP 390
           G PP    F  PPP G  G  PP G    P
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRP 918


>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1146

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 479 GXPPXXXXFXXPPPXGXGGXKPPPGGXXXP 390
           G PP    F  PPP G  G  PP G    P
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRP 918


>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 479 GXPPXXXXFXXPPPXGXGGXKPPPGGXXXP 390
           G PP    F  PPP G  G  PP G    P
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRP 918


>AL445209-3|CAI15184.1|  419|Homo sapiens POU domain, class 4,
           transcription factor 1 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +1

Query: 367 GGXXPXKGGXXXPPGGGFXPPXPXGGGXXKXXXXGGXP 480
           GG     GG   P GGG     P GGG       GG P
Sbjct: 141 GGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGP 178


>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
           protein rA4 protein.
          Length = 1157

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 479 GXPPXXXXFXXPPPXGXGGXKPPPGGXXXP 390
           G PP    F  PPP G  G  PP G    P
Sbjct: 899 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRP 928


>AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.
          Length = 929

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 479 GXPPXXXXFXXPPPXGXGGXKPPPGGXXXP 390
           G PP    F  PPP G  G  PP G    P
Sbjct: 671 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRP 700


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,812,157
Number of Sequences: 237096
Number of extensions: 1301611
Number of successful extensions: 5321
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4527
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)