Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_E08
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 2.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.5
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 5.9
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 565 PXXXPXXXXXXXXPPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
P P PP P PP PPP P P P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPP-PMCPPPPPPPPPP 72
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP P PP PPP P P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP PP PPP P P P PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP P PP PPP P P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP PP PPP P P P PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP PP PPP P P P PP
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 110
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP P PP PPP P P P P
Sbjct: 85 PPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP PP PPP P P P PP
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 332
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP P PP PPP P P P P
Sbjct: 307 PPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 340
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP P PP PPP P P PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 604 PPXXXXPXPPXXXXXXXPPPXPXXXPXXXPXXPP 705
PP PP PPP P P P PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +1
Query: 622 PXPPXXXXXXXPPPXPXXXPXXXPXXPPTXQ 714
P PP PPP P P P PP +
Sbjct: 123 PAPPNPPRTCCPPPTPAAPPPPPPPPPPAPE 153
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 705 WGXXXXXXWGXXWXWGGXRXXXXXGXXRGXXXGG 604
WG WG WGG R G G GG
Sbjct: 693 WGGNGGGGWGNNDPWGGSRWGGGRGGWGGGGWGG 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,110,965
Number of Sequences: 27780
Number of extensions: 73762
Number of successful extensions: 1197
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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