Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E07
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46935-8|CAL36511.1|  365|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z46935-7|CAL36510.1|  373|Caenorhabditis elegans Hypothetical pr...    40   0.001
AF045646-2|AAK29827.1|  371|Caenorhabditis elegans Collagen prot...    33   0.28 
AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen prot...    31   0.65 
AL117202-16|CAD91710.1|  121|Caenorhabditis elegans Hypothetical...    31   0.86 
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    28   6.0  
Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    28   8.0  
L23648-6|AAA28032.2|  390|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z46935-8|CAL36511.1|  365|Caenorhabditis elegans Hypothetical
           protein M106.3b protein.
          Length = 365

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -3

Query: 202 WIQSGKLKVKEHVTEGFDKLFDAFIGMLAGENYGKAVVK 86
           W+Q  K+KVKE + +G +    AF+ M+ G+N GK +++
Sbjct: 326 WLQQDKIKVKETIYDGLNAAPSAFVDMMNGKNIGKMLIR 364



 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 444 GVXWYFDDVGGXIXXQIISXMXXYGXVSVC 355
           G+  Y+D+VGG I   +I  M   G V +C
Sbjct: 244 GIDIYWDNVGGVISDDVIRAMNNEGRVVLC 273


>Z46935-7|CAL36510.1|  373|Caenorhabditis elegans Hypothetical
           protein M106.3a protein.
          Length = 373

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -3

Query: 202 WIQSGKLKVKEHVTEGFDKLFDAFIGMLAGENYGKAVVK 86
           W+Q  K+KVKE + +G +    AF+ M+ G+N GK +++
Sbjct: 334 WLQQDKIKVKETIYDGLNAAPSAFVDMMNGKNIGKMLIR 372



 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 444 GVXWYFDDVGGXIXXQIISXMXXYGXVSVC 355
           G+  Y+D+VGG I   +I  M   G V +C
Sbjct: 252 GIDIYWDNVGGVISDDVIRAMNNEGRVVLC 281


>AF045646-2|AAK29827.1|  371|Caenorhabditis elegans Collagen protein
           103 protein.
          Length = 371

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = +1

Query: 580 GXETXPXGTXTXGXPXXPGXPXRXPGXGXSGXWXGARKTXXTXPAGRPXP 729
           G    P      G P  PG P    G G +G   G+     T PAG P P
Sbjct: 143 GPRGPPGQAGLDGLPGAPGQPGSNGGAGSNGASEGSAGGCKTCPAGPPGP 192


>AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen protein
           102 protein.
          Length = 460

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 22/74 (29%), Positives = 22/74 (29%)
 Frame = +1

Query: 511 GEXXPRAISGXXPXAXGAXXXXGGXETXPXGTXTXGXPXXPGXPXRXPGXGXSGXWXGAR 690
           GE  P    G    A  A       E    G      P  P  P   PG   S    GA 
Sbjct: 141 GEPGPPGPEGPAGPAGPAGNAGADGEAGAEGPAGEAGPPGPPGPDGKPGAAGSDGEAGAP 200

Query: 691 KTXXTXPAGRPXPA 732
            T  T   G P PA
Sbjct: 201 GTKTTNAPGEPGPA 214


>AL117202-16|CAD91710.1|  121|Caenorhabditis elegans Hypothetical
           protein Y47D3A.20 protein.
          Length = 121

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = +2

Query: 68  ISLMLHFDYGFSVILSGKHSYKSIKEFIESFRDMFLYFQFPTLNPRK*FLQTPSTDHSSA 247
           I +  HF   FS  LS   +  S+ +F   F+     F FP LN  K  +Q+P    S  
Sbjct: 4   ICIFSHFLSRFSRTLSLSRTTSSLIQFPRLFKGFSSIFHFPPLNKPK--MQSPRASASPE 61

Query: 248 KREN 259
            R N
Sbjct: 62  PRRN 65


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.1 protein.
          Length = 448

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +1

Query: 529 AISGXXPXAXGAXXXXGGXETXPXGTXTXGXPXXPGXPXRXPGXGXSG 672
           AI+       G+    GG  T P G  T G P  PG P    G G  G
Sbjct: 15  AIASFNWPVDGSYRYSGGPGT-PGGPGTPGGPGTPGGPGTPGGLGTPG 61


>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
 Frame = +1

Query: 538 GXXPXAXGAXXXXGGXETXPXGTX-TXGXPXXPGXPXRXPGXGXSGXWXGARKTXXTXPA 714
           G    A G     G     P G     G P  PG P      G SG    A     T P 
Sbjct: 102 GGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161

Query: 715 GRPXPA 732
            +P PA
Sbjct: 162 CQPCPA 167


>L23648-6|AAA28032.2|  390|Caenorhabditis elegans Hypothetical
           protein F44B9.5 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 167 CHGRIR*TL*CFYRNACRRELRKSRSQSVT 78
           C  RI+ +   F+ +A RR+L K+RSQ+ T
Sbjct: 309 CAMRIKQSFPSFHLSAIRRDLEKTRSQTTT 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,306,273
Number of Sequences: 27780
Number of extensions: 203375
Number of successful extensions: 758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)