Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E03
         (926 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage f...    34   0.84 
X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.               34   0.84 
BC005000-1|AAH05000.1|  478|Homo sapiens CPSF6 protein protein.        34   0.84 
BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.        34   0.84 
AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and polyadenyl...    34   0.84 
BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        31   7.9  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     31   7.9  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    31   7.9  

>X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage
           factor I 68 kDa subunit protein.
          Length = 551

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 754 PXXRXGXXPPPXXLXGXPXXXPPXXXXPPCSPXXXXXSXPSXXPXLXRXXTPKTPXP 924
           P  R    PPP    G P   PP    PP  P       P   P   +   P  P P
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 322


>X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.
          Length = 551

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 754 PXXRXGXXPPPXXLXGXPXXXPPXXXXPPCSPXXXXXSXPSXXPXLXRXXTPKTPXP 924
           P  R    PPP    G P   PP    PP  P       P   P   +   P  P P
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 322


>BC005000-1|AAH05000.1|  478|Homo sapiens CPSF6 protein protein.
          Length = 478

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 754 PXXRXGXXPPPXXLXGXPXXXPPXXXXPPCSPXXXXXSXPSXXPXLXRXXTPKTPXP 924
           P  R    PPP    G P   PP    PP  P       P   P   +   P  P P
Sbjct: 193 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 249


>BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.
          Length = 588

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 754 PXXRXGXXPPPXXLXGXPXXXPPXXXXPPCSPXXXXXSXPSXXPXLXRXXTPKTPXP 924
           P  R    PPP    G P   PP    PP  P       P   P   +   P  P P
Sbjct: 303 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 359


>AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and
           polyadenylation specific factor 6, 68 kD subunit variant
           protein.
          Length = 551

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 754 PXXRXGXXPPPXXLXGXPXXXPPXXXXPPCSPXXXXXSXPSXXPXLXRXXTPKTPXP 924
           P  R    PPP    G P   PP    PP  P       P   P   +   P  P P
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 322


>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 20/81 (24%), Positives = 22/81 (27%)
 Frame = +2

Query: 683 TGGXGXXPGQPXXXXKKXXXXXKNPXXGSGXPPPXVXXXGXXXXXPXXXXXPXVLXARXX 862
           +GG    PG P             P  G+  PPP     G           P        
Sbjct: 94  SGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPP-PLPGLPSPQEAPPSAPPQAPPLPG 152

Query: 863 XALLPPXPXFXXXXPPKPPXP 925
               PP P      PP PP P
Sbjct: 153 SPEPPPAPPLPGDLPPPPPPP 173


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 20/81 (24%), Positives = 22/81 (27%)
 Frame = +2

Query: 683 TGGXGXXPGQPXXXXKKXXXXXKNPXXGSGXPPPXVXXXGXXXXXPXXXXXPXVLXARXX 862
           +GG    PG P             P  G+  PPP     G           P        
Sbjct: 512 SGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPP-PLPGLPSPQEAPPSAPPQAPPLPG 570

Query: 863 XALLPPXPXFXXXXPPKPPXP 925
               PP P      PP PP P
Sbjct: 571 SPEPPPAPPLPGDLPPPPPPP 591


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 20/81 (24%), Positives = 22/81 (27%)
 Frame = +2

Query: 683 TGGXGXXPGQPXXXXKKXXXXXKNPXXGSGXPPPXVXXXGXXXXXPXXXXXPXVLXARXX 862
           +GG    PG P             P  G+  PPP     G           P        
Sbjct: 403 SGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPP-PLPGLPSPQEAPPSAPPQAPPLPG 461

Query: 863 XALLPPXPXFXXXXPPKPPXP 925
               PP P      PP PP P
Sbjct: 462 SPEPPPAPPLPGDLPPPPPPP 482


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,480,837
Number of Sequences: 237096
Number of extensions: 2299258
Number of successful extensions: 6746
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6387
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)