Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E02
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         30   2.0  
06_03_1310 + 29238644-29240260                                         29   6.0  
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    29   6.0  
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411           28   7.9  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 32/147 (21%), Positives = 39/147 (26%)
 Frame = +3

Query: 318 PAPPHRVAGVHRXKPRSPRTX*PXXXXPQTPRTPDLXHHAGQGXXTTHQXXHPPRXRXKP 497
           P PP     V + KP+ P +  P    P  P  P                  PP     P
Sbjct: 165 PRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPP 224

Query: 498 XPQTPXQRNHXXRXTAXXXQNPPXTPXRXDPXXXRXAXXPXXSRXXXXXPPXXTXLPGXX 677
            P  P +              PP  P R  P        P  S      PP  + LP   
Sbjct: 225 PPTVPPRTPGDTPAVVEPKPQPPPPPPRA-PVKMPRVLEPKPS------PPPPSPLPPPP 277

Query: 678 TPHLASXGAGXXXPXPXXXAPXXXPPP 758
             + +        P      P   PPP
Sbjct: 278 EDYWSPTAVTPPEPTKPKPPPPSPPPP 304


>06_03_1310 + 29238644-29240260
          Length = 538

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 30/117 (25%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
 Frame = +1

Query: 361 PEAPEHXSRXXPXPRRXEPRTSXTMPGRAXPPPTKXXTRHG-----XGXSXHRKHPXNVT 525
           P  P   S   P      P T    P  + PP T   + HG        S   +HP  V 
Sbjct: 395 PPTPPPPSSPTPSHLPPPPPTYSESPKSSMPPSTSPPSSHGASPPSSSSSPPTEHPGYVL 454

Query: 526 TXXGXRPXXTKTXPXHR--XAGTPXRXDXXXXXPXR--XXKXXXRPXXXTCXGXPPP 684
                 P  T T P H     GTP         P +    K    P        PPP
Sbjct: 455 PPL-TPPPPTTTPPGHHAPVPGTPSSPPSSSWSPPQGGGGKLPFPPVHGVAYSSPPP 510


>01_03_0117 +
           12684729-12685886,12685978-12686145,12686292-12686336,
           12686438-12687280
          Length = 737

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 32/149 (21%), Positives = 42/149 (28%), Gaps = 1/149 (0%)
 Frame = +1

Query: 316 NRPRLIESXESIAXNPEAPEHXSRXXPX-PRRXEPRTSXTMPGRAXPPPTKXXTRHGXGX 492
           +R R +    S++   +AP H     P  P    P    T    A  P T          
Sbjct: 125 SRVRAMPPSPSLSPPAKAPSHSHAKTPSMPPAERPALPPTKAPAAISPATPPQLSPANAH 184

Query: 493 SXHRKHPXNVTTXXGXRPXXTKTXPXHRXAGTPXRXDXXXXXPXRXXKXXXRPXXXTCXG 672
           S H  H     +     P      P H    +P +       P +      RP       
Sbjct: 185 STH--HHAKPPSLPPAEPPVPSPSPEHPPRHSPSKPPAYA--PAKPPTAL-RPAIPPAAM 239

Query: 673 XPPPTSXPXGPXXXXHXPXXXPPXXXPXQ 759
             PP+  P  P      P   PP   P Q
Sbjct: 240 PKPPSVAPVQPPQRPPAPATKPPPSFPPQ 268


>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
          Length = 885

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/54 (25%), Positives = 18/54 (33%)
 Frame = +1

Query: 352 AXNPEAPEHXSRXXPXPRRXEPRTSXTMPGRAXPPPTKXXTRHGXGXSXHRKHP 513
           A  P+         P PR  EP     +P    PPP     R+  G     + P
Sbjct: 113 ARRPQKQRKVEVASPTPRADEPDVVLVLPPSQRPPPLSPAARNHHGADLPARSP 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,975,084
Number of Sequences: 37544
Number of extensions: 258641
Number of successful extensions: 863
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)