Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_D18
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.77
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.77
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.77
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.0
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 3.1
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 3.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical p... 28 7.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 403 PPXPGXPPQKXPGALPXSTPPGXXXPIXPKXXXXLXPE 516
PP P PP G P PPG P+ P L P+
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 807
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 403 PPXPGXPPQKXPGALPXSTPPGXXXPIXPKXXXXLXPE 516
PP P PP G P PPG P+ P L P+
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 807
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 403 PPXPGXPPQKXPGALPXSTPPGXXXPIXPKXXXXLXPE 516
PP P PP G P PPG P+ P L P+
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 390
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 189 GAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 247
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 219 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 277
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 309 GAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 367
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 399 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 457
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 414 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 472
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 429 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 487
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 249 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 339 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 397
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 444 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 502
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGX--YFXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNP 202
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 369 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 427
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 384 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 442
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 234 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 292
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 294 GAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 352
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 324 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 382
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 313 GSXPAGVXRGPXRXXRHXIPXGXY--FXPTXTPPXPGXP-PQKXPGALPXSTPPGXXXP 480
G+ P+G GP G F P+ PP G P P GA P PPG P
Sbjct: 354 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 412
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 394 TXTPPXPGXPPQKXPGALPXST-PPG 468
T TPP P P PG+ P +T PPG
Sbjct: 211 TVTPPSPSVTPGGRPGSTPPATFPPG 236
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 394 TXTPPXPGXPPQKXPGALPXST-PPG 468
T TPP P P PG+ P +T PPG
Sbjct: 134 TVTPPSPSVTPGGRPGSTPPATFPPG 159
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = +1
Query: 316 SXPAGVXRGPXRXXRHXIPXGXYFXPTXTPPXPGXPPQKXPGALPXSTPPGXXXPIXPKX 495
S PA + +GP P G P P Q PG +P S PPG P P
Sbjct: 254 SGPADIPQGPGMP--RAFPPGASAPVAPGMPGAFPPGQGGPG-MPGSFPPGAPGPGGPGM 310
Query: 496 XXXLXPEXQNFXG-GXXPAG 552
P G G P+G
Sbjct: 311 PGSFAPGAPGPGGPGGYPSG 330
>Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical
protein F01D4.3 protein.
Length = 561
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 382 YFXPTXTPPXPGXPPQKXPGALPXST 459
YF P P PP PGA P ST
Sbjct: 12 YFTPAQKSNKPKSPPNASPGAAPTST 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,642,841
Number of Sequences: 27780
Number of extensions: 118397
Number of successful extensions: 486
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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