Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_D17
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.020
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.25
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.44
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 2.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.020
Identities = 28/121 (23%), Positives = 29/121 (23%), Gaps = 4/121 (3%)
Frame = +1
Query: 412 PXXPPKPRGXFPXXXPP----GXXPKXPXXXPXTXXXPXXXXXXXXXGXXPXPXXXNXXX 579
P PP+ PP P P P T P P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 580 XXXXTPGPPXXXPXXPXXPXSQTXXXPXXXPXXXPXXXPXXLPPXXPXXPPTPPXRXXXP 759
P P P P P P P LP P PP PP P
Sbjct: 399 SAPALP-PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Query: 760 P 762
P
Sbjct: 458 P 458
Score = 29.9 bits (64), Expect = 0.44
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +1
Query: 601 PPXXXPXXPXX-PXSQTXXXPXXXPXXXPXXXPXXLPPXXPXXPPTPPXRXXXPP 762
PP P P P S P P LP P PP PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 28.7 bits (61), Expect = 1.0
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 595 PGPPXXXPXXPXXPXSQTXXXPXXXPXXXPXXXPXXLPPXXPXXPPTPPXRXXXP 759
P P P P P S P P P P LPP P PP P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPL--PAGMPAAPP--LPPAAPAPPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 597 GPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXP-XPPXPXXXPXXP 740
G P PL P P P P G P P P P PP P P P
Sbjct: 442 GAPAAPPLPPSAPIAP--PLPAG-MPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.3
Identities = 24/100 (24%), Positives = 26/100 (26%)
Frame = +3
Query: 411 PPXXPKTPGXXSXXXPPGXXPXXSXXXPXYXXXPXXXXXXXXAGXXXPPPXXQXPXXXXX 590
P P PG + PP + P P A PP P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPV----PTPPSLPPSAPPSLPPSAP--PSLPMG 442
Query: 591 NPGPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXPXP 710
P P P P P LP P P P P P
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +2
Query: 635 PPPKXXRXXGXXPXXXXXXXXXSXPPXXPXXPXXPPPXPXNPXXXLSPPXQXP 793
PPP R G P PP P P P +PP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 624 PXXPXLPNXXXPXGPXPXXPXXXPXXPXP--PXPXXXPXXPXPXPXT 758
P P LPN P P P P P P P P P P P P T
Sbjct: 104 PREPPLPNEPVPEEPLPGEP-PLPDEPVPEEPLPGEPPLPNEPVPET 149
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.25
Identities = 31/149 (20%), Positives = 36/149 (24%)
Frame = +3
Query: 315 PNRXGCPPGXXXXPXXXXXXAXXXXXXPXXXXPPXXPKTPGXXSXXXPPGXXPXXSXXXP 494
P + P P A P P P S PP P + P
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP-LPSADAPPIPVPSTAPPVP 1044
Query: 495 XYXXXPXXXXXXXXAGXXXPPPXXQXPXXXXXNPGPPXXXPLXPXXPXLPNXXXPXGPXP 674
P +G PP P + P P P +P P P
Sbjct: 1045 IPTSTPPVPKSS--SGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
Query: 675 XXPXXXPXXPXPPXPXXXPXXPXPXPXTP 761
P P P P P P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 30.3 bits (65), Expect = 0.33
Identities = 35/144 (24%), Positives = 37/144 (25%)
Frame = +2
Query: 362 PXXXGXXXXPXPXXXXPPXXPQNPGXXFPXXXPRGXPXXFPXXSXXPXXXPXXLXXPXGX 541
P G P P PP P+ P P G P P S P P G
Sbjct: 1086 PAPSGIPPVPKPSVAAPPV-PKPSVAVPPVPAPSGAPPV-PKPSVAAPPVPV----PSGA 1139
Query: 542 XXXPXPXXXTPXXXXGQPRAPXXXPPXPXXXPPPKXXRXXGXXPXXXXXXXXXSXPPXXP 721
P P P P P P PP G P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPV---PKPSVAAPPVPAPSSGIPPVPKPAA---GVPPVPP 1193
Query: 722 XXPXXPPPXPXNPXXXLSPPXQXP 793
P P P + PP P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/69 (23%), Positives = 18/69 (26%)
Frame = +3
Query: 555 PPXXQXPXXXXXNPGPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXPXPPXPXXXPX 734
PP + P P P+ P P P P P P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 735 XPXPXPXTP 761
P P P
Sbjct: 1200 VPKPSVGVP 1208
Score = 27.1 bits (57), Expect = 3.1
Identities = 29/127 (22%), Positives = 31/127 (24%), Gaps = 5/127 (3%)
Frame = +3
Query: 396 PXXXXPPXXPKTPGXXSXXXPPGXXPXXSXXXPXYXXXPXXXXXXXXAGXXXPPPXXQXP 575
P P P P S PP P + P A P P
Sbjct: 1112 PPVPAPSGAPPVP-KPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 576 XXXXXNPGPPXXXPLXPXXPXLPNXXXPXGPXPXX--PXXXPXXPXPPXPXXX---PXXP 740
+ PP P P P P P P P P PP P P P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 741 XPXPXTP 761
P P
Sbjct: 1231 VPTAKAP 1237
Score = 25.8 bits (54), Expect = 7.1
Identities = 27/122 (22%), Positives = 29/122 (23%)
Frame = +3
Query: 396 PXXXXPPXXPKTPGXXSXXXPPGXXPXXSXXXPXYXXXPXXXXXXXXAGXXXPPPXXQXP 575
P P P P S PP P + P P P P
Sbjct: 1131 PPVPVPSGAPPVP-KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 576 XXXXXNPGPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXPXPPXPXXXPXXPXPXPX 755
+ PP P P P P P P P P P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAP--PVPTPSAGLPPVPVPTAKA--PPVPAPSSE 1245
Query: 756 TP 761
P
Sbjct: 1246 AP 1247
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.44
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = +3
Query: 555 PPXXQXPXXXXXNPGPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXPXPPXPXXXPX 734
PP P P P P+ P +P+ P P P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA-QPAAPVKSP-PSAPSLPSAVPP 196
Query: 735 XPXPXPXTP 761
P P P
Sbjct: 197 MPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/80 (25%), Positives = 22/80 (27%), Gaps = 1/80 (1%)
Frame = +2
Query: 557 PXXXTPXXXXGQPRAPXXXPPXPXXXPPPKXXRXXGXXPXXXXXXXXXSXPPXXPXXP-X 733
P P + R P PP P PP P PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP--PIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 734 XPPPXPXNPXXXLSPPXQXP 793
PP P P P + P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVP 202
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = +3
Query: 540 GXXXPPPXXQXPXXXXXNPGPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXPXPPXP 719
G P P + PP P P P P P P P P PP P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPP--PMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Query: 720 -XXXPXXPXP 746
P P P
Sbjct: 1737 ASSAPSVPNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 591 NPGPPXXXPLXPXXPXLPNXXXPXGPXPXXPXXXPXXPXPPXPXXXPXXPXPXPXTPXXX 770
+P PP + P P P P P P PP P P P P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP-----PPPPPPGVAGAGPPPPPPPPPAV 785
Query: 771 S 773
S
Sbjct: 786 S 786
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,646,606
Number of Sequences: 5004
Number of extensions: 19338
Number of successful extensions: 136
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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