Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_D16
         (1079 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   3.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   3.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   3.3  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily a...    29   5.7  
AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily a...    29   5.7  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   5.7  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 614 PPXXXXPXXXXGGPPPPXXPXXXXXXXGXPQXTPP 718
           PP    P    GGPPPP  P       G P   PP
Sbjct: 714 PPPPGLPPIT-GGPPPPPPPGGLPPITGGPPPPPP 747



 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 614 PPXXXXPXXXXGGPPPPXXPXXXXXXXGXPQXTPP 718
           PP    P    GGPPPP  P       G P   PP
Sbjct: 730 PPPGGLPPIT-GGPPPPPPPGGLPPISGGPPPPPP 763


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 614 PPXXXXPXXXXGGPPPPXXPXXXXXXXGXPQXTPP 718
           PP    P    GGPPPP  P       G P   PP
Sbjct: 714 PPPPGLPPIT-GGPPPPPPPGGLPPITGGPPPPPP 747



 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 614 PPXXXXPXXXXGGPPPPXXPXXXXXXXGXPQXTPP 718
           PP    P    GGPPPP  P       G P   PP
Sbjct: 730 PPPGGLPPIT-GGPPPPPPPGGLPPISGGPPPPPP 763


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 614 PPXXXXPXXXXGGPPPPXXPXXXXXXXGXPQXTPP 718
           PP    P    GGPPPP  P       G P   PP
Sbjct: 297 PPPPGLPPIT-GGPPPPPPPGGLPPITGGPPPPPP 330



 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 614 PPXXXXPXXXXGGPPPPXXPXXXXXXXGXPQXTPP 718
           PP    P    GGPPPP  P       G P   PP
Sbjct: 313 PPPGGLPPIT-GGPPPPPPPGGLPPISGGPPPPPP 346


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 19/77 (24%), Positives = 22/77 (28%)
 Frame = +2

Query: 785  PKXPPQXXXXXXXXXXKPXPXPXXSXTXXPRKPXKKXQPXSXXXPXXXXPXTXAXXXXXX 964
            P  PP            P P P    T  PR P  +  P +   P    P T        
Sbjct: 123  PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRT------PP 176

Query: 965  XXXXXXPPXXXPXKLPP 1015
                  PP   P  +PP
Sbjct: 177  SPEPRNPPRTPPSPIPP 193


>AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform b protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 597 TXPXPPPXRXXXPKXXPAGPPPQ 665
           T P PPP     P   PA PPP+
Sbjct: 90  TPPPPPPKPTIRPPPIPASPPPR 112


>AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform a protein.
          Length = 996

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 597 TXPXPPPXRXXXPKXXPAGPPPQ 665
           T P PPP     P   PA PPP+
Sbjct: 312 TPPPPPPKPTIRPPPIPASPPPR 334


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 611 APPXXXXPXXXXGGPPPPXXP 673
           APP    P    GGPPPP  P
Sbjct: 575 APPPPPPPPPMLGGPPPPPPP 595


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,886,630
Number of Sequences: 27780
Number of extensions: 190874
Number of successful extensions: 1117
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2898039926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)