Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_D15
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    29   0.060
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.32 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.32 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.9  
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    21   9.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.1  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 678 WLSPEVLEQNFKGYDERXDIYSFGVLCCELANGAVP 571
           +++PEV+    KG+D   D +S GVL  EL  G  P
Sbjct: 531 YVAPEVILN--KGHDISADYWSLGVLMFELLTGTPP 564


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 675 LSPEVLEQNFKGYDERXDIYSFGVLCCELANGAV 574
           ++PE+L  +   YD   D+Y+FG+L   L  G V
Sbjct: 761 MAPELLSGH---YDSSVDVYAFGILFWYLCAGHV 791


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 675 LSPEVLEQNFKGYDERXDIYSFGVLCCELANGAV 574
           ++PE+L  +   YD   D+Y+FG+L   L  G V
Sbjct: 799 MAPELLSGH---YDSSVDVYAFGILFWYLCAGHV 829


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 143 FGRFLDNHLGEL 178
           FGR++DN LGEL
Sbjct: 622 FGRYVDNLLGEL 633


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 450 ILFI-SLSSXQGSGKVEQSRSWGRLXFTF 533
           ILF+ ++S  Q   K++   SW  L F F
Sbjct: 9   ILFLLAISDSQAQEKLKNIYSWKALEFAF 37


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 367 ETFHQLTDVTLQRDPE 320
           E+FH+LT  T   DP+
Sbjct: 222 ESFHRLTSNTFDYDPK 237


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
          transcriptase protein.
          Length = 42

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 92 TYINIQCVNHSIAICLNKTTFMIKS 18
          TY    C++H I I  NK    I S
Sbjct: 16 TYFQQYCLHHKILIKKNKCNAFIVS 40


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 135 KSHSVDFSITISESCS 182
           K + +DF I ++E C+
Sbjct: 519 KENEIDFKIEVTEDCN 534


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,406
Number of Sequences: 438
Number of extensions: 3954
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)