Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_D14
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.011
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.011
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.034
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.034
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.034
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 35 0.059
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 34 0.10
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 34 0.10
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.31
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 32 0.55
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 0.72
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 0.72
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.96
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.96
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.7
AL032630-3|CAA21560.1| 214|Caenorhabditis elegans Hypothetical ... 30 1.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.2
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 2.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.9
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.9
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.9
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.9
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.9
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.9
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPX 639
PP S P P P P P PP S+ P +G P PP + P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Query: 640 PTRXRXXGXCXRXXXGXXPXXRPPPXXP*TP 732
P R G P PPP P P
Sbjct: 350 PPPPRYPS----AGPGMYPP--PPPSRPPAP 374
Score = 33.1 bits (72), Expect = 0.24
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 8/112 (7%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXS---KXPVPXVGAXPXPPXXPLXPXXX 630
PP P P P P P PP P P G P PP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP- 319
Query: 631 FPXPTRXRXXGXCXRXXXG----XXPXXRPPPXXP*TPQXXPXR-PXXPXHR 771
P P+R G P PPP P P P P P R
Sbjct: 320 -PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPX 639
PP S P P P P P PP S+ P +G P PP + P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Query: 640 PTRXRXXGXCXRXXXGXXPXXRPPPXXP*TP 732
P R G P PPP P P
Sbjct: 360 PPPPRYPS----AGPGMYPP--PPPSRPPAP 384
Score = 33.1 bits (72), Expect = 0.24
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 8/112 (7%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXS---KXPVPXVGAXPXPPXXPLXPXXX 630
PP P P P P P PP P P G P PP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP- 329
Query: 631 FPXPTRXRXXGXCXRXXXG----XXPXXRPPPXXP*TPQXXPXR-PXXPXHR 771
P P+R G P PPP P P P P P R
Sbjct: 330 -PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +1
Query: 472 PXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP--XXPLXPXXXFPXPT 645
P P P P P GS PP P P G+ P PP P P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 646 R 648
R
Sbjct: 293 R 293
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +1
Query: 418 PHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPX 597
P +GS + + PP P P P P GS PP P P G+ P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 598 PP 603
PP
Sbjct: 300 PP 301
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 451 AARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP--XXPLXPX 624
A PP P P P P PP P P G+ P PP P P
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 625 XXFPXP 642
P P
Sbjct: 294 AGSPPP 299
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/131 (22%), Positives = 35/131 (26%), Gaps = 3/131 (2%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXX 546
PPP S +P S R P P P P P +
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 547 PPXXSKXPVPXVGAXPXPPXXPLXPXXXF---PXPTRXRXXGXCXRXXXGXXPXXRPPPX 717
PP P G+ P P P P P R + G P PP
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
Query: 718 XP*TPQXXPXR 750
P P+ P +
Sbjct: 358 RP--PRGGPGK 366
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +1
Query: 472 PXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP--XXPLXPXXXFPXPT 645
P P P P P GS PP P P G+ P PP P P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 646 R 648
R
Sbjct: 314 R 314
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +1
Query: 418 PHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPX 597
P +GS + + PP P P P P GS PP P P G+ P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 598 PP 603
PP
Sbjct: 321 PP 322
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 451 AARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP--XXPLXPX 624
A PP P P P P PP P P G+ P PP P P
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 625 XXFPXP 642
P P
Sbjct: 315 AGSPPP 320
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/131 (22%), Positives = 35/131 (26%), Gaps = 3/131 (2%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXX 546
PPP S +P S R P P P P P +
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 547 PPXXSKXPVPXVGAXPXPPXXPLXPXXXF---PXPTRXRXXGXCXRXXXGXXPXXRPPPX 717
PP P G+ P P P P P R + G P PP
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 378
Query: 718 XP*TPQXXPXR 750
P P+ P +
Sbjct: 379 RP--PRGGPGK 387
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +1
Query: 472 PXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP--XXPLXPXXXFPXPT 645
P P P P P GS PP P P G+ P PP P P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 646 R 648
R
Sbjct: 299 R 299
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +1
Query: 418 PHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPX 597
P +GS + + PP P P P P GS PP P P G+ P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 598 PP 603
PP
Sbjct: 306 PP 307
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 451 AARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP--XXPLXPX 624
A PP P P P P PP P P G+ P PP P P
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 625 XXFPXP 642
P P
Sbjct: 300 AGSPPP 305
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/131 (22%), Positives = 35/131 (26%), Gaps = 3/131 (2%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXX 546
PPP S +P S R P P P P P +
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 547 PPXXSKXPVPXVGAXPXPPXXPLXPXXXF---PXPTRXRXXGXCXRXXXGXXPXXRPPPX 717
PP P G+ P P P P P R + G P PP
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 363
Query: 718 XP*TPQXXPXR 750
P P+ P +
Sbjct: 364 RP--PRGGPGK 372
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +1
Query: 451 AARPPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXX 630
A P P P+ P P P PP K P P G P P L P
Sbjct: 535 AGYKPAPPLINPYIPPPPPPHPEEEYATPYTVPP--GKQPFPPFGEGPATPPRSLIPAHN 592
Query: 631 FPXPT 645
FP P+
Sbjct: 593 FPPPS 597
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/100 (26%), Positives = 29/100 (29%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXP 642
P P P +P P P PG+ PP P+ P P P P P P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGP-P 162
Query: 643 TRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
G P P P P P P P P
Sbjct: 163 GDSGEPGSPGLPGQDAAP-GEPGPKGPPGPPGAPGAPGTP 201
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/100 (26%), Positives = 29/100 (29%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXP 642
P P P +P P P PG+ PP P+ P P P P P P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGP-P 162
Query: 643 TRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
G P P P P P P P P
Sbjct: 163 GDSGEPGSPGLPGQDAAP-GEPGPKGPPGPPGAPGAPGTP 201
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.31
Identities = 39/143 (27%), Positives = 44/143 (30%), Gaps = 9/143 (6%)
Frame = +1
Query: 370 PPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXX----PXPXX-PG 534
PPS H A H S+ + PP P PH+P P P PG
Sbjct: 42 PPSNFQAMHYNHNYMA-HAASIAHTY-GGYPPPYPYQHPHQPPPAHPHHLQHPHPYAYPG 99
Query: 535 SXXXPPXXSKXPVPXVG---AXPXPPXXPLXPXXXFPXPTRXRXXGXCXRXXXGXXPXXR 705
+ P P G A P PP P P R P R
Sbjct: 100 YPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPP-RVPRTPPPRSPPPR 158
Query: 706 PPPXXP*TPQXXPXR-PXXPXHR 771
PP P +PQ P R P P R
Sbjct: 159 RPPMTPPSPQRRPPRTPPSPEPR 181
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/102 (24%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P P P P PG+ PP P+ P P P P P P
Sbjct: 109 PAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGP----P 164
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
G P P P P P P P
Sbjct: 165 GAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEP 206
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.72
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP-PXXPLXPXXXFP 636
PP SP P P P P P + PP P P V P P P
Sbjct: 94 PPASPCCGP-SPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAA 152
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPP 714
P C P +P P
Sbjct: 153 MPPPPSAPACCVAAPVPTNPCCQPAP 178
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP-PXXPLXPXXXFP 636
P SP P+ P P P P P S P PVP P P P P P P
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPP--PAS----PCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
Query: 637 XPT 645
P+
Sbjct: 128 TPS 130
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.72
Identities = 27/103 (26%), Positives = 31/103 (30%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXP 642
P P P +P P P PG+ PP P+ P P P P P P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGP-P 162
Query: 643 TRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXPXHR 771
G P P P P P P P P H+
Sbjct: 163 GDSGEPGSPGLPGQDAAP-GEPGPKGPKGP---PGAPGAPEHQ 201
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/89 (25%), Positives = 24/89 (26%), Gaps = 2/89 (2%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG PP P P P P P P
Sbjct: 108 PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 167
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP 723
P G P R PP P
Sbjct: 168 DPGEAGTPGRPGTDATPGLPGPRGPPGPP 196
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/89 (25%), Positives = 24/89 (26%), Gaps = 2/89 (2%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG PP P P P P P P
Sbjct: 108 PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 167
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP 723
P G P R PP P
Sbjct: 168 DPGEAGTPGRPGTDATPGLPGPRGPPGPP 196
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/94 (27%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +1
Query: 469 SPXXXPHEPXX-PXXXPXPXXPGSXXXPPXXSKX-PVPXVGAXPXPPXXPLXPXXXFPXP 642
+P P P P P P P PP ++ P P + P PP P P P P
Sbjct: 32 TPMCQPRMPCAAPMPMPMPM-PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPP----PPP 86
Query: 643 TRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXP 744
R C P P P PQ P
Sbjct: 87 PMPRPSCPCMMQRPSFYPSYVPQYYQPMMPQPMP 120
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PP P P P P P P
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 165
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPP 714
P G P R PP
Sbjct: 166 DPGEAGTPGRPGTDAAPGSPGPRGPP 191
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PP P P P P P P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPP 714
P G P R PP
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGPP 186
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PP P P P P P P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPP 714
P G P R PP
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGPP 186
>AL032630-3|CAA21560.1| 214|Caenorhabditis elegans Hypothetical
protein Y62H9A.3 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 493 PXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPP 603
P P P P P S PP P+P P PP
Sbjct: 50 PLPPASYPVPNFPNSWPLPPASRLVPIPQEYPAPFPP 86
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPL 615
PP P P P P P PG PP +P +G P P P+
Sbjct: 699 PPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQG----IPPMGFDPNKPPPPM 746
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXP 621
P P P +P P P PG+ PP P P P P P
Sbjct: 94 PQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPP 146
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXP--GSXXXPP-XXSKXPVPXVGAXPXPPXXPLXPXXXF 633
P P P P P P P P G PP ++ P P GA P P P P F
Sbjct: 780 PMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGA-PEIPARPQVPKRPF 838
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -2
Query: 641 GXGXCXXGXRGXXGGXGXAPTXGTGNLLXXGGXXW---XPGXXGXGXXWGIXGSWGXXXG 471
G G C G GG AP+ G G GG G G G G G G
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTG 267
Query: 470 DXGGRA 453
GG A
Sbjct: 268 GGGGYA 273
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -2
Query: 641 GXGXCXXGXRGXXGGXGXAPTXGTGNLLXXGGXXW---XPGXXGXGXXWGIXGSWGXXXG 471
G G C G GG AP+ G G GG G G G G G G
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTG 267
Query: 470 DXGGRA 453
GG A
Sbjct: 268 GGGGYA 273
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Frame = +1
Query: 358 SRAPPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGS 537
+R PPP + AP R L + P P P P P P S
Sbjct: 572 ARPPPPPPSSGTR----GIAPSR-PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPIS 626
Query: 538 XXXPPXXSKXP---VPXVGAXPXPPXXPLXP 621
PP P +P VGA PP P P
Sbjct: 627 SAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Frame = +1
Query: 358 SRAPPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGS 537
+R PPP + AP R L + P P P P P P S
Sbjct: 398 ARPPPPPPSSGTR----GIAPSR-PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPIS 452
Query: 538 XXXPPXXSKXP---VPXVGAXPXPPXXPLXP 621
PP P +P VGA PP P P
Sbjct: 453 SAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 598 PPXXPLXPXXXFPXPTRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXPXH 768
PP P P P P C P PPP P P P P P +
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSY 84
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXP--GSXXXPP-XXSKXPVPXVGAXPXPPXXPLXPXXXF 633
P P P P P P P P G PP ++ P P GA P P P P F
Sbjct: 780 PMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGA-PEIPARPQVPKRPF 838
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +1
Query: 502 PXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXPTRXRXXGXCXRXX 681
P P P P + PP P PP P P P R G C
Sbjct: 88 PQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQR-TGGCLPSP 146
Query: 682 XGXXPXXRPP-PXXP*TPQXXPXR 750
G +PP P PQ P R
Sbjct: 147 RGYENQPQPPQPQQQQYPQPQPQR 170
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +1
Query: 502 PXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXPTRXRXXGXCXRXX 681
P P P P + PP P PP P P P R G C
Sbjct: 88 PQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQR-TGGCLPSP 146
Query: 682 XGXXPXXRPP-PXXP*TPQXXPXR 750
G +PP P PQ P R
Sbjct: 147 RGYENQPQPPQPQQQQYPQPQPQR 170
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +1
Query: 502 PXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXPTRXRXXGXCXRXX 681
P P P P + PP P PP P P P R G C
Sbjct: 88 PQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQR-TGGCLPSP 146
Query: 682 XGXXPXXRPP-PXXP*TPQXXPXR 750
G +PP P PQ P R
Sbjct: 147 RGYENQPQPPQPQQQQYPQPQPQR 170
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 430 SLXXSXXAARPPXSPXXXPHEPXX-PXXXPXPXXPG-SXXXPPXXSKXPVPXVGAXPXPP 603
S S + PP +P P P P P P S PP P+ + P PP
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 515
Query: 604 XXPLXP 621
P P
Sbjct: 516 PPPPPP 521
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/55 (27%), Positives = 18/55 (32%)
Frame = +1
Query: 472 PXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFP 636
P P +P P P PG+ PP P+ P P P P P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGP 161
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/55 (27%), Positives = 18/55 (32%)
Frame = +1
Query: 472 PXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFP 636
P P +P P P PG+ PP P+ P P P P P
Sbjct: 74 PAGTPGKPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGP 128
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/55 (27%), Positives = 18/55 (32%)
Frame = +1
Query: 472 PXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFP 636
P P +P P P PG+ PP P+ P P P P P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGP 161
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/102 (24%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PV P P P P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP-P 164
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
P G P P P P P P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/102 (24%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PV P P P P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP-P 164
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
P G P P P P P P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 493 PXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXPTR 648
P P P G P S P P GA P PP P P P+R
Sbjct: 55 PDPSSPPPAPRPSGQPPGPQGPSDLPGPS-GAPPGPPHPSGPPHRPHPHPSR 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXX 546
PPP P G L PP P P P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP---PPPPPPPGGCP 769
Query: 547 PPXXSKXPVPXVGAXPXPP 603
PP P G P PP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXP 612
PP P P P P G PP P P G P PP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXX 546
PPP P G L PP P P P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP---PPPPPPPGGCP 769
Query: 547 PPXXSKXPVPXVGAXPXPP 603
PP P G P PP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXP 612
PP P P P P G PP P P G P PP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 765
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/102 (24%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PV P P P P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP-P 164
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
P G P P P P P P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/102 (24%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXP--PXXPLXPXXXFP 636
P P P +P P P PG+ PV P P P P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP-P 164
Query: 637 XPTRXRXXGXCXRXXXGXXPXXRPPPXXP*TPQXXPXRPXXP 762
P G P P P P P P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXXX 546
PPP P G L PP P P P P P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP---PPPPPPPGGCP 352
Query: 547 PPXXSKXPVPXVGAXPXPP 603
PP P G P PP
Sbjct: 353 PPPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXP 612
PP P P P P G PP P P G P PP P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 348
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 9/70 (12%)
Frame = +1
Query: 460 PPXSPXXXPHEPXXPXXXPXPXXP-GSXXXPPXXSKXPVPXVGAX--------PXPPXXP 612
PP P P P P P P G P + P+ VG P PP P
Sbjct: 69 PPGPPPHGPPPPHLLHALPHPAYPPGHPLHMPGMTMMPMGPVGPPMMAGMPMRPMPPLPP 128
Query: 613 LXPXXXFPXP 642
+ P P P
Sbjct: 129 MTPMGSMPHP 138
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 460 PPXSPXXXPH-EPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXP 612
PP P PH EP P P + PP P GA P PP P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTP--PSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 460 PPXSPXXXPH-EPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXP 612
PP P PH EP P P + PP P GA P PP P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTP--PSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = -2
Query: 710 GGRXXGXXPXXXRXQXP-WXRXRVGXGXCXXGXRGXXGGXGXAPTXGTGNLLXXGGXXWX 534
GGR G P W R G G G G G G G GG
Sbjct: 37 GGRSGGWGRPGWGGGGPGWGRGGGGSGW-GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRG 95
Query: 533 PGXXGXGXXWGIXGSWGXXXGDXGGR 456
G G G G G G G GGR
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGGGGGR 121
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPX-PXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPX 639
P P P P P P S PP P P P PP P P
Sbjct: 214 PVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPG 273
Query: 640 PTRXRXXG 663
P R G
Sbjct: 274 PPTRRPPG 281
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = +1
Query: 484 PHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFPXPTRXRXXG 663
P P P P PG P P P P P P P P R G
Sbjct: 118 PGRPGAPGAWGMPGNPGKGGSGPCHPVVPTP---CKPCPGGRPGPPG----PPGRPGSDG 170
Query: 664 XCXRXXXGXXPXXRPPPXXP*TPQXXP 744
R G RP P P P+ P
Sbjct: 171 QPGRPATGGGAAPRPGPPGPKGPRGAP 197
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 484 PHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXP 621
P P P P PG P P P P PP P P
Sbjct: 115 PGTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAP 160
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHR-GSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXXPGSXX 543
PPP H P G S A PP P P P P P +
Sbjct: 490 PPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANG 549
Query: 544 XPPXXSKXPVPXV-GAXPXPPXXPLXPXXXFPXP 642
PP P+ + GA P P P P
Sbjct: 550 GPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 620 GXRGXXGGXGXAPTXGTGNLLXXGGXXWXPGXXGXGXXWGIXGSWGXXXGDXGGR 456
G GG G + G G G PG G G G G G GGR
Sbjct: 499 GAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGR 553
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/63 (34%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = -2
Query: 641 GXGXCXXGXRGXXGGXGXAPTXGTGNLLXXGGXX--WXPGXXGXGXXWGIXGSWGXXXGD 468
G G G RG GG G GN GG W G G G G G WG
Sbjct: 54 GGGWGRGGGRG--GGDWGGNNGGGGNWGGNGGGRGDWG-GNGGGGRGGGGRGDWGGNNNG 110
Query: 467 XGG 459
GG
Sbjct: 111 GGG 113
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/58 (25%), Positives = 18/58 (31%)
Frame = +1
Query: 463 PXSPXXXPHEPXXPXXXPXPXXPGSXXXPPXXSKXPVPXVGAXPXPPXXPLXPXXXFP 636
P P P +P P PG+ PP P+ P P P P P
Sbjct: 114 PAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPGP 171
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 620 GXRGXXGGXGXAPTXGTGNLLXXGGXXWXPGXXGXGXXWGIXGSWGXXXGDXGGR 456
G GG G + G G G PG G G G G G GGR
Sbjct: 499 GAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGR 553
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = +1
Query: 367 PPPSXXXXSHRXXXXXAPHRGSLXXSXXAARPPXSPXXXPHEPXXPXXXPXPXX-PGSXX 543
P P R P S PP + + P P P P +
Sbjct: 514 PAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLS 573
Query: 544 XPPXXSKXPVPXVGAXPXPPXXP 612
P P P +G P PP P
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPP 596
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,999,856
Number of Sequences: 27780
Number of extensions: 115831
Number of successful extensions: 827
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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