Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_D13
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 43 2e-04
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 43 2e-04
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 40 0.002
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.004
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.004
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.004
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.005
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.005
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.005
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.044
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 36 0.044
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 36 0.044
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 35 0.078
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.14
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 34 0.14
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 34 0.14
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 33 0.18
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 33 0.31
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 33 0.31
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 33 0.31
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.41
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.55
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.55
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.72
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.72
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.72
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.72
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 0.96
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 31 1.3
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 1.7
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 1.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.9
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.9
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 3.9
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.1
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 5.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.1
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 5.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 5.1
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 29 5.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 6.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 8.9
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 8.9
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 28 8.9
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/110 (27%), Positives = 32/110 (29%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G LPGP P PP P P + P +P
Sbjct: 158 GPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRG-PPGPPGEAGQPGPQGDAGTPAQSEP 216
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
T PG G AGP P P G P P G G
Sbjct: 217 L-TPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDG 265
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G AG P
Sbjct: 127 PGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGP-PGAPGDPGEAGTPGRPGTDATPG 185
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
G P P G G
Sbjct: 186 LPGPRGPPGPPGEAGQPGPQG 206
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/110 (27%), Positives = 32/110 (29%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G LPGP P PP P P + P +P
Sbjct: 158 GPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRG-PPGPPGEAGQPGPQGDAGTPAQSEP 216
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
T PG G AGP P P G P P G G
Sbjct: 217 L-TPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDG 265
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G AG P
Sbjct: 127 PGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGP-PGAPGDPGEAGTPGRPGTDATPG 185
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
G P P G G
Sbjct: 186 LPGPRGPPGPPGEAGQPGPQG 206
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = -2
Query: 670 GXGXXGXXLDPDXNXXXGXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXX 491
G G G G GG G A PPPP G G G G GG G G
Sbjct: 84 GCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Query: 490 NXGGXXGYXXG 458
GG G G
Sbjct: 144 GGGGGCGGGGG 154
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = -2
Query: 619 GXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXG--PGXX 446
G GG G A PPPP G G G G G G G GG G G G
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 103
Query: 445 XTXXXXNXKXXPPRXGXXXGXGSXG 371
PP G G G G
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 35.9 bits (79), Expect = 0.034
Identities = 25/83 (30%), Positives = 25/83 (30%)
Frame = -2
Query: 619 GXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPGXXXT 440
G GG G PPPP G G G GG G G GG G G G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCG-GGGGGCGGGGGGCGG 101
Query: 439 XXXXNXKXXPPRXGXXXGXGSXG 371
PP G G G
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGG 124
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -1
Query: 743 GGXXGXXEXEXGXXGXXAXSXPPPRXRXXXXXXGPGXKXXXGXXGXXXGACXXPPXPXXG 564
GG G G G A PPP G G G G G C G
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGC--GGGCGGGGGGGCGGGGGGGCG 150
Query: 563 VGXGXXXIXXSGXXGGG 513
G G G GGG
Sbjct: 151 GGGGGCGGGGGGCGGGG 167
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = +3
Query: 456 GPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFX 635
GP P PP P P PP P P PG G GP PP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPP----- 765
Query: 636 SGSXXXPXXPXPGG 677
G P P PGG
Sbjct: 766 GGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = +3
Query: 399 PXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGG 578
P GG + P P P P P P PP P P GG
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 579 GGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPG 674
P PP P F G P P PG
Sbjct: 768 -----CPPPPPPPPPGGFKGG---PPPPPPPG 791
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXF-XXSPXPXPPSXXPRXX 539
GG P P P P GG + + G P P S P PP P
Sbjct: 711 GGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 540 DPXXTXPHPGXGGGGXXAGPXXXPP 614
P P P GG GP PP
Sbjct: 769 PPPPPPPPP----GGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPX-RGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXX 539
GG P P P P GG + + G P PP P P PP +
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 540 DPXXTXPHPGXGGGGXXAGPXXXPP 614
P P PG P PP
Sbjct: 784 PP--PPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = +3
Query: 456 GPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFX 635
GP P PP P P PP P P PG G GP PP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPP----- 765
Query: 636 SGSXXXPXXPXPGG 677
G P P PGG
Sbjct: 766 GGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = +3
Query: 399 PXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGG 578
P GG + P P P P P P PP P P GG
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 579 GGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPG 674
P PP P F G P P PG
Sbjct: 768 -----CPPPPPPPPPGGFKGG---PPPPPPPG 791
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXF-XXSPXPXPPSXXPRXX 539
GG P P P P GG + + G P P S P PP P
Sbjct: 711 GGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 540 DPXXTXPHPGXGGGGXXAGPXXXPP 614
P P P GG GP PP
Sbjct: 769 PPPPPPPPP----GGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPX-RGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXX 539
GG P P P P GG + + G P PP P P PP +
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 540 DPXXTXPHPGXGGGGXXAGPXXXPP 614
P P PG P PP
Sbjct: 784 PP--PPPPPGMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = +3
Query: 456 GPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFX 635
GP P PP P P PP P P PG G GP PP P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPP----- 348
Query: 636 SGSXXXPXXPXPGG 677
G P P PGG
Sbjct: 349 GGCPPPPPPPPPGG 362
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = +3
Query: 399 PXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGG 578
P GG + P P P P P P PP P P GG
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 579 GGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPG 674
P PP P F G P P PG
Sbjct: 351 -----CPPPPPPPPPGGFKGG---PPPPPPPG 374
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXF-XXSPXPXPPSXXPRXX 539
GG P P P P GG + + G P P S P PP P
Sbjct: 294 GGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 540 DPXXTXPHPGXGGGGXXAGPXXXPP 614
P P P GG GP PP
Sbjct: 352 PPPPPPPPP----GGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPX-RGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXX 539
GG P P P P GG + + G P PP P P PP +
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 540 DPXXTXPHPGXGGGGXXAGPXXXPP 614
P P PG P PP
Sbjct: 367 PP--PPPPPGMFAPMAPVIPDYLPP 389
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/75 (32%), Positives = 26/75 (34%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
P P PP SP P PP PR P + P P GG AG PP P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 337
Query: 633 XSGSXXXPXXPXPGG 677
+ P P G
Sbjct: 338 QAPERSPPTGSPPTG 352
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +2
Query: 371 PXGPXPXXXPPXGGXXFXVXXXXGXXXPGPPXVPXXXPXIXXXSXPXXPLXTXPXSXSXP 550
P G P PP G G P PP P S P P + P +
Sbjct: 233 PAGSPPPPPPPKGSPPLA-----GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 551 XRXPPRXGGXGXXXRPXXXPP 613
PPR G P PP
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/75 (32%), Positives = 26/75 (34%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
P P PP SP P PP PR P + P P GG AG PP P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 358
Query: 633 XSGSXXXPXXPXPGG 677
+ P P G
Sbjct: 359 QAPERSPPTGSPPTG 373
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +2
Query: 371 PXGPXPXXXPPXGGXXFXVXXXXGXXXPGPPXVPXXXPXIXXXSXPXXPLXTXPXSXSXP 550
P G P PP G G P PP P S P P + P +
Sbjct: 254 PAGSPPPPPPPKGSPPLA-----GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 551 XRXPPRXGGXGXXXRPXXXPP 613
PPR G P PP
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/75 (32%), Positives = 26/75 (34%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
P P PP SP P PP PR P + P P GG AG PP P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 343
Query: 633 XSGSXXXPXXPXPGG 677
+ P P G
Sbjct: 344 QAPERSPPTGSPPTG 358
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +2
Query: 371 PXGPXPXXXPPXGGXXFXVXXXXGXXXPGPPXVPXXXPXIXXXSXPXXPLXTXPXSXSXP 550
P G P PP G G P PP P S P P + P +
Sbjct: 239 PAGSPPPPPPPKGSPPLA-----GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 551 XRXPPRXGGXGXXXRPXXXPP 613
PPR G P PP
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPP 314
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.044
Identities = 28/112 (25%), Positives = 30/112 (26%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P P +P P P +P
Sbjct: 156 GPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG-PPGPAGEAGAPGPAGEPGTPAISEP 214
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXGXS 701
T PG G GP P P G P P G G S
Sbjct: 215 L-TPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQS 265
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G AG P P
Sbjct: 125 PGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGP-PGAPGDPGEAG---TPGRPGTDA 180
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
GS P P G G
Sbjct: 181 APGSPGPRGPPGPAGEAGAPG 201
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 35.5 bits (78), Expect = 0.044
Identities = 28/112 (25%), Positives = 30/112 (26%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P P +P P P +P
Sbjct: 151 GPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG-PPGPAGEAGAPGPAGEPGTPAISEP 209
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXGXS 701
T PG G GP P P G P P G G S
Sbjct: 210 L-TPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQS 260
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G AG P P
Sbjct: 120 PGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGP-PGAPGDPGEAG---TPGRPGTDA 175
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
GS P P G G
Sbjct: 176 APGSPGPRGPPGPAGEAGAPG 196
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 35.5 bits (78), Expect = 0.044
Identities = 28/112 (25%), Positives = 30/112 (26%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P P +P P P +P
Sbjct: 151 GPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG-PPGPAGEAGAPGPAGEPGTPAISEP 209
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXGXS 701
T PG G GP P P G P P G G S
Sbjct: 210 L-TPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQS 260
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G AG P P
Sbjct: 120 PGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGP-PGAPGDPGEAG---TPGRPGTDA 175
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
GS P P G G
Sbjct: 176 APGSPGPRGPPGPAGEAGAPG 196
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 34.7 bits (76), Expect = 0.078
Identities = 27/110 (24%), Positives = 29/110 (26%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G LPG P P P P+ P P
Sbjct: 207 GAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGP 266
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
PG G GP P P G+ P P P G G
Sbjct: 267 IGPPGQPG-APGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQPGAGG 315
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 670 GXGXXGXXLDPDXNXXXGXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXX 491
G G P G GG G PPP P G G G GG G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGC 103
Query: 490 NXGG 479
GG
Sbjct: 104 GGGG 107
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 670 GXGXXGXXLDPDXNXXXGXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXX 491
G G P G GG G PPP P G G G GG G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGC 103
Query: 490 NXGG 479
GG
Sbjct: 104 GGGG 107
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/110 (25%), Positives = 30/110 (27%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P PP +P P +P
Sbjct: 154 GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKG-PPGPPGAPGAPGTPGEPGVPAQSEP 212
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
PG G AGP P P GS P P G G
Sbjct: 213 LI----PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPG 258
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/110 (25%), Positives = 30/110 (27%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P PP +P P +P
Sbjct: 154 GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKG-PPGPPGAPGAPGTPGEPGVPAQSEP 212
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
PG G AGP P P GS P P G G
Sbjct: 213 LI----PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPG 258
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -2
Query: 619 GXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPG-XXX 443
G G GP PP PG G G RG G G G G G PG
Sbjct: 147 GPAGPAGGPGPKGPPGPPG-GHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQ 205
Query: 442 TXXXXNXKXXPPRXGXXXGXGSXG 371
+ P + G G G G
Sbjct: 206 VRSLPSPPGEPGQPGEPGGPGEPG 229
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G GP P
Sbjct: 113 PGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGP-PGPQGNKGPLGPPGPPGPEGPNG 171
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
+G+ P PGG G
Sbjct: 172 TAGNKGPAGPPGPGGKPGPAG 192
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 32.7 bits (71), Expect = 0.31
Identities = 32/124 (25%), Positives = 36/124 (29%), Gaps = 8/124 (6%)
Frame = +2
Query: 398 PPXGGXXFXVXXXXGXXXPGP------PXVPXXXPXIXXXSXPXXPLXTXPXSXSXPXRX 559
PP G G PGP P P P P + P + P
Sbjct: 226 PPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGAF 285
Query: 560 PPRXGGXGXXXRPXXXPPXSPXX--VXIRVQXXPXXSXPGGXGGXXRXFXXXPTPPXXXP 733
PP GG G P PP +P + P PGG GG P P
Sbjct: 286 PPGQGGPGM---PGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPGMQGGYP 342
Query: 734 XXPP 745
PP
Sbjct: 343 GGPP 346
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/110 (26%), Positives = 31/110 (28%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P PP +P PR +P
Sbjct: 154 GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKG-PKGPPGAPGAPEHQESQECPRG-EP 211
Query: 546 XXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
PG G AGP P P GS P P G G
Sbjct: 212 LI----PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPG 257
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 32.7 bits (71), Expect = 0.31
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG P PP P PP P P PG G GP P
Sbjct: 115 PGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGP-PGPDGNKGPLGPPGPPGPEGPNG 173
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
G+ P PGG G
Sbjct: 174 EPGNKGPAGPPGPGGKPGPAG 194
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXX-PRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXX 629
P P PP P P PP P P +P G G P PP P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP--- 374
Query: 630 FXSGSXXXPXXPXP 671
SG P P P
Sbjct: 375 -PSGHGMIPPPPPP 387
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSP--XPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXX 626
P P PP +P P PP P P PG G PP P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 627 XFXSGSXXXPXXPXPG 674
G P P PG
Sbjct: 325 FGPPGMGGMPPPPPPG 340
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +3
Query: 453 PGPXXYPXXPPX--FXXSPXPXPPSXXPRXXD-PXXTXPHPGXGGGGXXAGPXXXPPXPX 623
PG P PP P P PP P P P P G G PP P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Query: 624 XXFXSGSXXXPXXPXP 671
+ G P P
Sbjct: 341 MRYPGGMPPPPPPRYP 356
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXX-PRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXX 629
P P PP P P PP P P +P G G P PP P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP--- 384
Query: 630 FXSGSXXXPXXPXP 671
SG P P P
Sbjct: 385 -PSGHGMIPPPPPP 397
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSP--XPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXX 626
P P PP +P P PP P P PG G PP P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 627 XFXSGSXXXPXXPXPG 674
G P P PG
Sbjct: 335 FGPPGMGGMPPPPPPG 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +3
Query: 453 PGPXXYPXXPPX--FXXSPXPXPPSXXPRXXD-PXXTXPHPGXGGGGXXAGPXXXPPXPX 623
PG P PP P P PP P P P P G G PP P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Query: 624 XXFXSGSXXXPXXPXP 671
+ G P P
Sbjct: 351 MRYPGGMPPPPPPRYP 366
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXP 620
P P P P P PP P P P PG GGG P P P
Sbjct: 763 PSPVPRPAPAPP-GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRP 817
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXP 620
P P P P P PP P P P PG GGG P P P
Sbjct: 763 PSPVPRPAPAPP-GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRP 817
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Frame = +3
Query: 453 PGPXXYPXXP--PXFXXSPX-PXPPSXXPRXXDPXXTXP--HPGXGGGGXXAGPXXXPPX 617
PGP P P P +P P P T P P GG AGP P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 618 PXXXFXSGSXXXPXXPXPGGXXAXXG 695
P GS P P P G G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAG 192
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Frame = +3
Query: 453 PGPXXYPXXP--PXFXXSPX-PXPPSXXPRXXDPXXTXP--HPGXGGGGXXAGPXXXPPX 617
PGP P P P +P P P T P P GG AGP P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 618 PXXXFXSGSXXXPXXPXPGGXXAXXG 695
P GS P P P G G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAG 192
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Frame = +3
Query: 453 PGPXXYPXXP--PXFXXSPX-PXPPSXXPRXXDPXXTXP--HPGXGGGGXXAGPXXXPPX 617
PGP P P P +P P P T P P GG AGP P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 618 PXXXFXSGSXXXPXXPXPGGXXAXXG 695
P GS P P P G G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAG 192
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Frame = +3
Query: 453 PGPXXYPXXP--PXFXXSPX-PXPPSXXPRXXDPXXTXP--HPGXGGGGXXAGPXXXPPX 617
PGP P P P +P P P T P P GG AGP P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 618 PXXXFXSGSXXXPXXPXPGGXXAXXG 695
P GS P P P G G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAG 192
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.96
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = -1
Query: 764 AXXPAPPGGXXGXXEXEXGXXGXXAXSXPPPRXRXXXXXXGPGXKXXXGXXGXXXGACXX 585
A P PPG G PP PG G G C
Sbjct: 254 AGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPC 313
Query: 584 PPXPXXGVGXGXXXIXXSGXXGGG 513
PP G G G +G GGG
Sbjct: 314 PPRTPAGGGGGGD--FPAGGGGGG 335
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Frame = +3
Query: 450 LPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXG-------GGGXXAGPXXX 608
+PGP PP P PP + P G GG AGP
Sbjct: 200 VPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPG- 258
Query: 609 PPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
PP P SG P P P G G
Sbjct: 259 PPGPPGQDGSGGAAQPGPPGPPGPPGNDG 287
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 564 PGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
PG G AGP P P +GS P P P G G
Sbjct: 183 PGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDG 226
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 516 PSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
PS P P PG GG GP P P +G+ P P G
Sbjct: 203 PSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGTPGAPGNAG 256
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -2
Query: 568 PGWGXVXXGSXXRGXXEGGXG-XGXXXNXGGXXGYXXGPG 452
PGWG GS G GG G G N GG G G G
Sbjct: 53 PGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGG 92
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 565 GWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPG 452
GWG G G GG G G GG G G G
Sbjct: 42 GWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGG 79
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = -1
Query: 764 AXXPAPPGGXXGXXEXEXGXXGXXAXSXPPPRXRXXXXXXGPGXKXXXGXXGXXXGACXX 585
A P PPG E G G PP + PG G G C
Sbjct: 230 AGPPGPPGPPGSPGENTEGAPGLDGPLGPPGKPGTPGTDGAPGVFGDDGVPGQDAQYCQC 289
Query: 584 PPXPXXG 564
PP G
Sbjct: 290 PPRTPIG 296
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Frame = +3
Query: 450 LPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGP--XXXPPXPX 623
LPG +P P +P P P P P GG G P P P
Sbjct: 92 LPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPG 151
Query: 624 XXFXSGSXXXPXXPXPGG 677
SG P P G
Sbjct: 152 NKGPSGPNGNPGAPGAPG 169
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/116 (25%), Positives = 29/116 (25%), Gaps = 8/116 (6%)
Frame = +3
Query: 372 PXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXP--------PXFXXSPXPXPPSXX 527
P P P P G PGP P P P P P P
Sbjct: 147 PGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGE 206
Query: 528 PRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
P PG G AGP P P SG P P G G
Sbjct: 207 PGTEYKPGQPGRPGPPGPRGEAGPAGQPGSPGNDGESGKPGNAGRPGPPGAPGKNG 262
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/107 (28%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Frame = +2
Query: 440 GXXXPGPPXVPXXXPXIXXXSXPXXPLXTXPXSXSXPXRXPPRXGGXGXXXRPXXXPPXS 619
G PGP P P S P P P PP G P P S
Sbjct: 174 GPPSPGPVD-PSEDPQPSGSSSPGP---VDPSDEPSPS-GPPSPGPVDPSEDPKPSEPPS 228
Query: 620 PXXVXIRVQXXPXX--SXPGGXGGXXRXFXXXPTPPXXXPXXPPXXP 754
P V + P PG G R P PP P PP P
Sbjct: 229 PGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +3
Query: 453 PGPXXYPXXP-PXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXX 629
PGP P P SP P PS P DP PG G P PP P
Sbjct: 212 PGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGP---PGPPGPPTRRPPG--PPGPPTR 266
Query: 630 FXSGSXXXPXXPXPG 674
G P PG
Sbjct: 267 RPPGPPGPPTRRPPG 281
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXP 611
P P P P P PP P P P PG GGG P P
Sbjct: 763 PSPVPRPAPAPP-GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/81 (25%), Positives = 23/81 (28%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXF 632
PG +P PP P PP P PG G G P P
Sbjct: 124 PGAPGHPGKPPQSPCEPLTPPPC-------PACPPGPPGAPGAPGKPGSEGPPGPPGHDG 176
Query: 633 XSGSXXXPXXPXPGGXXAXXG 695
+G P P P G G
Sbjct: 177 PNGGPGQPGQPGPHGPNGHPG 197
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXP 611
P P P P P PP P P P PG GGG P P
Sbjct: 763 PSPVPRPAPAPP-GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 498 SPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
SP P P+ P P PG G G AGP P +G+ P P G
Sbjct: 170 SPGPAGPAGPPGPPGPDGA---PGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDG 226
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 498 SPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
SP P P+ P P PG G G AGP P +G+ P P G
Sbjct: 170 SPGPAGPAGPPGPPGPDGA---PGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDG 226
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -2
Query: 592 AXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPG 452
A PPPP P +G + G+ G GG + G GY G
Sbjct: 64 APPPPPPPPAFGGLGGGAAYPGAGAGGQ-YDTGVHGGAQGGYAGAQG 109
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -2
Query: 592 AXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPG 452
A PPPP P +G + G+ G GG + G GY G
Sbjct: 64 APPPPPPPPAFGGLGGGAAYPGAGAGGQ-YDTGVHGGAQGGYAGAQG 109
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -2
Query: 592 AXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPG 452
A PPPP P +G + G+ G GG + G GY G
Sbjct: 64 APPPPPPPPAFGGLGGGAAYPGAGAGGQ-YDTGVHGGAQGGYAGAQG 109
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXY--PXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG + GP P P P P PS P
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 298
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 299 GGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 345
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXX--YPXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG GP P P P P PS P
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 420
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXY--PXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG + GP P P P P PS P
Sbjct: 329 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 388
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 435
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXY--PXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG + GP P P P P PS P
Sbjct: 179 GGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPS 238
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 285
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXX--YPXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG GP P P P P PS P
Sbjct: 194 GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 253
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG 300
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXX--YPXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG + GP P P P P PS P
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 448
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 449 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 495
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXX--YPXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG + GP P P P P PS P
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 463
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 464 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 510
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXY--PXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG GP P P P P PS P
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPS 208
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 209 GGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 255
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXY--PXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG GP P P P P PS P
Sbjct: 344 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 403
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 450
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXX--YPXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG GP P P P P PS P
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 433
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 434 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 480
Score = 28.3 bits (60), Expect = 6.7
Identities = 27/103 (26%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXX--YPXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG + GP P P P P PS P
Sbjct: 419 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAP-- 476
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXP 665
P P P G +G P P SG P P
Sbjct: 477 --PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXY--PXXPPXFXXSPXPXPPSXXPRX 536
GG P P P GG GP P P P P PS P
Sbjct: 359 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 418
Query: 537 XDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGG 677
P G G GP P G P GG
Sbjct: 419 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 465
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 619 GXGGXXXGPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXG 458
G GG G P GWG G RG GG G GG G G
Sbjct: 34 GWGGNRWGGGGGPG----GWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG 83
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXP-PSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXX 629
PG P P P PS P P PG GG GP P
Sbjct: 184 PGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSGQP 243
Query: 630 FXSGSXXXPXXP----XPGGXXA 686
SG+ P P PGG A
Sbjct: 244 GHSGNDGVPGAPGNPGSPGGDAA 266
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +3
Query: 450 LPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXPHPGXGGGGXXAGP--XXXPPXPX 623
LPG P P +P P P P P GG G P P P
Sbjct: 125 LPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPG 184
Query: 624 XXFXSGSXXXPXXPXPGG 677
SG P P G
Sbjct: 185 NKGPSGPNGNPGAPGAPG 202
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/111 (22%), Positives = 25/111 (22%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXD 542
GG P P P P G GP P P P P
Sbjct: 209 GGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVG 268
Query: 543 PXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
P PG G GP P G P P G G
Sbjct: 269 PAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQNGAPG 319
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXPPSXXPRXXDPXXTXP-HPGXGGGGXXAGPXXXPPXPXXX 629
P P P SP P PP PR P P P P PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 630 FXSGSXXXPXXPXP 671
+ P P P
Sbjct: 182 NPPRTPPSPIPPPP 195
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/111 (22%), Positives = 25/111 (22%)
Frame = +3
Query: 363 GGXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXD 542
GG P P P P G GP P P P P
Sbjct: 190 GGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVG 249
Query: 543 PXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXPXPGGXXAXXG 695
P PG G GP P G P P G G
Sbjct: 250 PAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQNGAPG 300
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +3
Query: 366 GXPXDPXPXXXPXRGGXXXXXSFXXVXXLPGPXXYPXXPPXFXXSPXPXPPSXXPRXXDP 545
G P P P G PGP P P P P
Sbjct: 256 GPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDGTPGTD 315
Query: 546 XXTXPHPGXGGGGXXAG 596
P PG GGGG G
Sbjct: 316 AAYCPCPGRGGGGGGYG 332
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 450 LPGPXXYPXXPPXFXXSPXPXPPSXXP 530
+P P YP P F P P PP P
Sbjct: 57 VPPPPAYPFAPQVFTQPPPPPPPPVLP 83
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +3
Query: 516 PSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXP----XPGGXX 683
P+ P P PG GG GP P P G P P PGG
Sbjct: 203 PAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGQPGQDGQPGAPGNDGAPGGDA 262
Query: 684 A 686
A
Sbjct: 263 A 263
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 564 PGXGGGGXXAGPXXXPPXPXXXFXSGSXXXPXXP 665
P GGGG P PP P G P P
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLP 53
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -2
Query: 583 PPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXG 458
PPPP P + G G GG G + GG GY G
Sbjct: 158 PPPPAPSFSHAPSGGYSSGGSSGG-GYSSGGSSGG-GGYAGG 197
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = -2
Query: 598 GPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPGXXXTXXXXNXK 419
GPA P P P G+ G EG G G G PG
Sbjct: 181 GPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVTET 240
Query: 418 XXPPRXGXXXGXGSXGXPPP 359
P G G G P P
Sbjct: 241 PGTP--GPAGAAGPPGPPGP 258
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/76 (26%), Positives = 22/76 (28%), Gaps = 1/76 (1%)
Frame = +3
Query: 453 PGPXXYPXXPPXFXXSPXPXP-PSXXPRXXDPXXTXPHPGXGGGGXXAGPXXXPPXPXXX 629
PG P P P PS P P PG GG G P P
Sbjct: 191 PGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGHP 250
Query: 630 FXSGSXXXPXXPXPGG 677
+G+ P P G
Sbjct: 251 GQAGTPGTPGAPGNSG 266
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = -2
Query: 598 GPAXXPPPPXPGWGXVXXGSXXRGXXEGGXGXGXXXNXGGXXGYXXGPG 452
GPA P PP P GS +G G G G PG
Sbjct: 156 GPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGDKGPAGPNGNPGAPG 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,431,719
Number of Sequences: 27780
Number of extensions: 221173
Number of successful extensions: 1389
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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