Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_D12
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486     29   3.1  
08_01_0059 - 394001-394708                                             29   4.1  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   4.1  
09_03_0145 - 12749288-12751510                                         28   7.2  
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797     28   7.2  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.5  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    28   9.5  
02_01_0062 - 448105-448145,448780-448866,449664-449790                 28   9.5  
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696...    28   9.5  

>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
          Length = 296

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 572 SPPPPPXXXXPPXSXPXXPXXXXP 643
           SPPPPP    PP + P  P    P
Sbjct: 6   SPPPPPAPPSPPPALPCDPMPPPP 29


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXPXXXXPXXXXXGXSPXXP 679
           PPPPP    PP + P  P    P        P  P
Sbjct: 3   PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPP 37



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 572 SPPPPPXXXXPPXSXPXXP 628
           +PPPPP    PP S P  P
Sbjct: 16  TPPPPPRRAPPPPSPPIRP 34


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXPXXXXPXXXXXGXSPXXP 679
           PPPPP    PP   P  P    P        P  P
Sbjct: 356 PPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXPXXXXPXXXXXGXSPXXP 679
           PPPPP    PP   P       P     G  P  P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389


>09_03_0145 - 12749288-12751510
          Length = 740

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXPXXXXPXXXXXG 661
           PPPPP    PP + P  P    P     G
Sbjct: 33  PPPPPGIQPPPPALPGMPHGRPPPPFPGG 61


>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
          Length = 216

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXPXXXXPXXXXXGXSP 670
           PPPP     PP + P  P    P     G SP
Sbjct: 51  PPPPYCVYPPPPTKPALPAPLPPTPASPGDSP 82


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXP 628
           PPPPP    PP S P  P
Sbjct: 107 PPPPPPPPSPPPSAPPPP 124


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXP 628
           PPPPP    PP S P  P
Sbjct: 307 PPPPPLANGPPRSIPPPP 324


>02_01_0062 - 448105-448145,448780-448866,449664-449790
          Length = 84

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 572 SPPPPPXXXXPPXSXPXXPXXXXP 643
           SPPPPP    PP   P  P    P
Sbjct: 17  SPPPPPPPFFPPQWAPPVPGGGGP 40


>01_06_0357 -
           28668894-28669238,28669510-28669537,28669578-28669635,
           28669836-28669916,28670395-28670526,28670609-28670926,
           28672495-28673317
          Length = 594

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 575 PPPPPXXXXPPXSXPXXP 628
           PPPPP    PP S P  P
Sbjct: 2   PPPPPPPPPPPPSPPRLP 19


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,720,182
Number of Sequences: 37544
Number of extensions: 125571
Number of successful extensions: 1369
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)