Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_D09
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   174   5e-44
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  174 bits (424), Expect = 5e-44
 Identities = 101/213 (47%), Positives = 118/213 (55%), Gaps = 2/213 (0%)
 Frame = -1

Query: 756 WNTXVVIRDTRET*SGSIRRNHIPRVGDFNESNYYHGR*HRPSCIRDPXXXXXXXXXXXX 577
           WNT VVI  T     G  R+NHIPRVGDFNES YY       S +  P            
Sbjct: 180 WNTAVVISHTGRV-IGRSRKNHIPRVGDFNESTYY-----MESTLGHPVFETKYGRIGIN 233

Query: 576 XXXXXXX*CSDRM-ELRSFLIRQRRSPGEGG-SEYMWNVEARNAAITNCYFTAAINRVGY 403
                    +  M  L    I    S   G  SE +W +EARNAAI N  FT  INRVG 
Sbjct: 234 ICYGRHHPQNWMMYALNGAEIIFNPSATVGALSEPLWGIEARNAAIANHVFTVGINRVGT 293

Query: 402 EEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIR 223
           E FPNEFTS +G+PAHKD G FYGSSY   PDG R P LSR R+G+LIA +DLNL RQ +
Sbjct: 294 EVFPNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCK 353

Query: 222 DRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 124
           D   + MT RLDMY   +++V   DY+P +  E
Sbjct: 354 DAWGFRMTNRLDMYAQKITEVSNPDYRPDIRRE 386



 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -3

Query: 613 RYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATI 503
           +YG+I +NIC+GRHH  NWMM+  NGAEI+FNPSAT+
Sbjct: 226 KYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSATV 262


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 174 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 281
           C++TC G  S     CL S CSG S R ++ ++  C
Sbjct: 35  CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,907,522
Number of Sequences: 27780
Number of extensions: 346637
Number of successful extensions: 1034
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)