Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_D09
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.77 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.4  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 649 WKVTPXILYSRPRYGKIAVN 590
           W++T    Y  PRYG   +N
Sbjct: 210 WRITHNFFYFDPRYGNYNIN 229


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 378  SADGKPAHKDLGLFYGSSYFCGPDGVRCP 292
            +AD KP  K    F       GP+G++ P
Sbjct: 1119 TADNKPQLKPQKPFTSPGGIPGPNGIKMP 1147


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 677 AILTNPTTTMEGNTXHP 627
           +IL + TTT++  T HP
Sbjct: 451 SILESGTTTLQTRTMHP 467


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 171 DCSRTCPGVGSCNNN 215
           DC  TCP    C N+
Sbjct: 756 DCEMTCPAGCKCYND 770


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 617 TQIRQDRGEHL 585
           TQIR+DRG H+
Sbjct: 109 TQIRRDRGLHV 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,670
Number of Sequences: 438
Number of extensions: 4079
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)