Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_D06
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81472-1|CAB03889.1|  173|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U97002-11|AAY86259.1|  121|Caenorhabditis elegans Hypothetical p...    28   9.1  

>Z81472-1|CAB03889.1|  173|Caenorhabditis elegans Hypothetical
           protein C16D6.1 protein.
          Length = 173

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 673 GGPRXPXPXGXPPPH 717
           GGP  P P G PPPH
Sbjct: 67  GGPPGPPPHGPPPPH 81


>U97002-11|AAY86259.1|  121|Caenorhabditis elegans Hypothetical
           protein K09H11.11 protein.
          Length = 121

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 667 PPGGPRXPXPXGXPPPHP 720
           PPG    P P G  PPHP
Sbjct: 8   PPGQQPPPPPPGQQPPHP 25


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,571,582
Number of Sequences: 27780
Number of extensions: 214248
Number of successful extensions: 718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)