Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_D04
(1060 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 34 0.76
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 34 0.76
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 34 0.76
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 34 0.76
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 34 0.76
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 34 0.76
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 34 0.76
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 34 0.76
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 34 0.76
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 34 0.76
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 34 0.76
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 34 0.76
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 34 0.76
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 34 1.0
D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein. 26 2.4
BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, mem... 26 2.4
AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, mem... 26 2.4
AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein. 26 2.4
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 32 3.1
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 126
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 112 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 166
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 33.9 bits (74), Expect = 1.0
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 351 GRGXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
G G + R+P ++ P P SP P P P + P PP PP
Sbjct: 72 GMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPTLGGSGAPPPPPMPP 126
>D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein.
Length = 567
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +3
Query: 357 GXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPPXXP 524
G + R ++P AT +TP P P P T + T PP P P
Sbjct: 310 GLIENRPQSP-ATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPP 364
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 645 PPXPXTXTXTXXXAXPXPPTPXNXAQQXPNAXXXKNXPPXXHP 773
PP P T A P PP P A + PP P
Sbjct: 362 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQP 404
>BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +3
Query: 357 GXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPPXXP 524
G + R ++P AT +TP P P P T + T PP P P
Sbjct: 302 GLIENRPQSP-ATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPP 356
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 645 PPXPXTXTXTXXXAXPXPPTPXNXAQQXPNAXXXKNXPPXXHP 773
PP P T A P PP P A + PP P
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQP 396
>AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +3
Query: 357 GXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPPXXP 524
G + R ++P AT +TP P P P T + T PP P P
Sbjct: 302 GLIENRPQSP-ATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPP 356
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 645 PPXPXTXTXTXXXAXPXPPTPXNXAQQXPNAXXXKNXPPXXHP 773
PP P T A P PP P A + PP P
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQP 396
>AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein.
Length = 559
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +3
Query: 357 GXADPRXRTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPPXXP 524
G + R ++P AT +TP P P P T + T PP P P
Sbjct: 302 GLIENRPQSP-ATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPP 356
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 645 PPXPXTXTXTXXXAXPXPPTPXNXAQQXPNAXXXKNXPPXXHP 773
PP P T A P PP P A + PP P
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQP 396
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 32.3 bits (70), Expect = 3.1
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +3
Query: 378 RTPXATXQTPXXNHTXPXSPXXPXHPTRXTPHXXXTXXPTXPPXPP 515
R+P ++ P P SP P P P + P PP PP
Sbjct: 30 RSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPP 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.310 0.131 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,731,429
Number of Sequences: 237096
Number of extensions: 784279
Number of successful extensions: 1728
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14428948086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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