Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_D01
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 35 0.10
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.31
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.41
11_06_0610 - 25449085-25453284 32 0.71
12_02_1174 - 26696869-26698191 31 1.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 27 1.5
01_05_0490 + 22672241-22674679 31 1.6
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 30 2.2
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 2.2
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 30 2.9
07_03_1160 - 24430240-24431268 29 3.8
04_03_1017 + 21747044-21748051 29 5.0
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 28 8.8
03_01_0515 - 3864796-3865425 28 8.8
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/93 (27%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Frame = +3
Query: 624 PXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXP-TRGXXXXXXXQXXRAXC 800
P S TPA PP PP ++ R PP + G Q
Sbjct: 266 PSLTSDFFPTTPAAAPVPAPAAAAPPPAPPAPRSRRTPPRTRFSAGSGAEMNKQMASPPS 325
Query: 801 XXPKRXPPXGXPLXR-XXTTHXPXPPKSXPXSP 896
P PP P R TT P PP P P
Sbjct: 326 NPPPAPPPPPPPPSRFNNTTPKPPPPPPPPEPP 358
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +3
Query: 555 PXXXXXPXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRX 734
P P P P P P P G P P K P PP PP
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP----PPPPPPGGKKGG 376
Query: 735 PPXXPTRG 758
PP P +G
Sbjct: 377 PPPPPPKG 384
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +3
Query: 555 PXXXXXPXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRX 734
P P P P P P G +P P G PP PP +R
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRP 389
Query: 735 P--PXXPT 752
P P PT
Sbjct: 390 PAAPGVPT 397
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.41
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
Frame = +3
Query: 636 SPXXGKTPA-GPQKRGXPXXXKPPXPPXTQNTRXPPXXPTRGXXXXXXXQXXRAXCXXPK 812
SP K P+ P P PP PP P P Q A P
Sbjct: 528 SPSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPP- 586
Query: 813 RXPPXGXPLXRXXTTHXPXPPKSXPXSP 896
PP PL P PP P P
Sbjct: 587 -PPPPPPPLPNCLVPSPPPPPPPPPILP 613
Score = 31.5 bits (68), Expect = 0.94
Identities = 28/120 (23%), Positives = 33/120 (27%), Gaps = 12/120 (10%)
Frame = +3
Query: 573 PXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQN------TRX 734
P P P P P S T A +G P PP PP + +
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAP 712
Query: 735 PPXXP------TRGXXXXXXXQXXRAXCXXPKRXPPXGXPLXRXXTTHXPXPPKSXPXSP 896
PP P + G KR PP P P PP P +P
Sbjct: 713 PPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAP 772
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/88 (21%), Positives = 21/88 (23%)
Frame = +3
Query: 624 PXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXPTRGXXXXXXXQXXRAXCX 803
P +P P P P PP PP P C
Sbjct: 539 PTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCL 598
Query: 804 XPKRXPPXGXPLXRXXTTHXPXPPKSXP 887
P PP P + P PP P
Sbjct: 599 VPSPPPPPPPPPILPNRSVPPPPPPPPP 626
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.9 bits (69), Expect = 0.71
Identities = 26/116 (22%), Positives = 31/116 (26%), Gaps = 2/116 (1%)
Frame = +3
Query: 555 PXXXXXPXTPXXXXXXPXXN--PXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNT 728
P P P P + P P P K+ + P + PP T
Sbjct: 1043 PVKSSPPHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPPSTPEE 1102
Query: 729 RXPPXXPTRGXXXXXXXQXXRAXCXXPKRXPPXGXPLXRXXTTHXPXPPKSXPXSP 896
PP P A P PP PL P PP+ P P
Sbjct: 1103 SSPPSVPKASSPPTEKSLPPPATVSLP---PPTVKPLPPPVPVSSPPPPEKSPPPP 1155
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/95 (25%), Positives = 30/95 (31%)
Frame = +3
Query: 603 PXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXPTRGXXXXXXXQ 782
P P +P G TP+ P+ P K P P ++ + PP P G
Sbjct: 621 PESKASSPPPPAPE-GHTPSPPEST--PPSEKSPPTPESKASSPPPPTP-EGHTPSPPKS 676
Query: 783 XXRAXCXXPKRXPPXGXPLXRXXTTHXPXPPKSXP 887
P P H P PPKS P
Sbjct: 677 TPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTP 711
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/101 (23%), Positives = 34/101 (33%), Gaps = 3/101 (2%)
Frame = +3
Query: 603 PXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXPTRGXXXXXXXQ 782
P P +P G TP+ P K P PP PP + + P T +
Sbjct: 720 PESEASSPPPPAPE-GHTPS-PPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPE 777
Query: 783 XXRAXCXXPKRXPP-XGXPLXRXXTTHXPXPP--KSXPXSP 896
P++ PP P + P P +S P +P
Sbjct: 778 EKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTP 818
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 615 PXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXPT 752
P P SP + PA P P PP PP ++ PP PT
Sbjct: 435 PVGPPEKSPAYEEPPAAPST---PTSHGPP-PPEEESPEEPPEEPT 476
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 582 PXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXP 749
P P P P P K P K P +PP PP TR P P
Sbjct: 148 PPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKP 203
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/99 (27%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
Frame = +3
Query: 603 PXXNPXXPXXXSPXXGKTPAGPQKRGXPXXX-KPPXPPXTQNTRXPPXXPTRGXXXXXXX 779
P P P P P P P KP PP Q PP PTR
Sbjct: 146 PQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTR-------P 198
Query: 780 QXXRAXCXXPKRXPPXGXPLXRXXTTHXPXPPKSXPXSP 896
+ PK PP P + P PP P +P
Sbjct: 199 PSVKPPVVQPKPQPPPTLP----PPSPPPPPPTVPPRTP 233
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.1 bits (57), Expect(2) = 1.5
Identities = 17/61 (27%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +3
Query: 573 PXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQ-KRGXPXXXKPPXPPXTQNTRXPPXXP 749
P P P P P SP P P G P PP P PP P
Sbjct: 1155 PCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVP 1214
Query: 750 T 752
+
Sbjct: 1215 S 1215
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 423 PFPGXAPXXPXXPQGP 470
P P AP P P+GP
Sbjct: 1131 PLPLDAPPPPPLPEGP 1146
>01_05_0490 + 22672241-22674679
Length = 812
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/71 (29%), Positives = 26/71 (36%)
Frame = +3
Query: 684 PXXXKPPXPPXTQNTRXPPXXPTRGXXXXXXXQXXRAXCXXPKRXPPXGXPLXRXXTTHX 863
P PP PP T+ +R PP P+R P++ PP P
Sbjct: 638 PPQPPPPPPPTTRRSRKPPQPPSRPAPPPP---------PPPQQQPPF-YPRRAVVYYTY 687
Query: 864 PXPPKSXPXSP 896
P PP S P P
Sbjct: 688 PLPPPSPPLPP 698
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 666 PQKRGXPXXXKPPXPPXTQNTRXPPXXP 749
P+KRG P PP PP TR PP P
Sbjct: 53 PRKRGHP----PPPPPRRTRTRGPPARP 76
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 603 PXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXPT 752
P P P P P P K+G P PP PP R P PT
Sbjct: 358 PPPPPPPPPPPPPPRPPPPPPPIKKGAP----PPAPPKATMARFPKLSPT 403
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 624 PXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXPTRG 758
P S + P P+ P PP PP + PP PT G
Sbjct: 420 PPLPSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTG 464
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +3
Query: 573 PXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXP-PXXP 749
P P P NP P P GP K P P PP P P P
Sbjct: 234 PNGPIKPDQPPQPNPDMPPKPDQPPQPCPDGPPKPDQPPQPNPNGPPKPDQPPQPNPNGP 293
Query: 750 TR 755
++
Sbjct: 294 SK 295
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +3
Query: 573 PXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXP 737
P P P NP P P GP K P P PP P
Sbjct: 262 PDGPPKPDQPPQPNPNGPPKPDQPPQPNPNGPSKPDQPPRPNPDMPPKPDQPPQP 316
>04_03_1017 + 21747044-21748051
Length = 335
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 573 PXTPXXXXXXPXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPP-XTQNTRXPPXXP 749
P +P P +P P + TPA P +R P PP + P P
Sbjct: 108 PESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASP 167
Query: 750 TR 755
+R
Sbjct: 168 SR 169
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 603 PXXNPXXPXXXSPXXGKTPAGPQKRGXPXXXKPPXPP 713
P P P P P+ PQ RG PP PP
Sbjct: 26 PPPPPPHPPPPPPLEPAPPSTPQLRGEASPPPPPPPP 62
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +3
Query: 624 PXXXSPXXGKTPAGPQKRGXPXXXKPPXPPXTQNTRXPPXXP 749
P +P T + P P PP PP ++ PP P
Sbjct: 48 PPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,712,788
Number of Sequences: 37544
Number of extensions: 240810
Number of successful extensions: 854
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -