Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_C21
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...    89   4e-18
AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical ...    40   0.003
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    30   2.0  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 37/80 (46%), Positives = 52/80 (65%)
 Frame = -1

Query: 264 NRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHSFIKMSYCVGEAG 85
           NR G ++ G EK    S+++ED    NHT+V+GS+WR+G+WGYKCCH F+K SYC G+ G
Sbjct: 377 NRKGKVIKGKEKVAISSRFKEDIYPQNHTSVFGSFWREGRWGYKCCHQFVKNSYCTGKQG 436

Query: 84  KTVVLPVSDDKKLSTSTDGI 25
             +    S  K  +TS + I
Sbjct: 437 --IEAETSAAKGTTTSNEEI 454



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 29/73 (39%), Positives = 47/73 (64%)
 Frame = -3

Query: 478 FXWEGXAHGLDLHLXAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPREL 299
           F W+    G+  H  AEPTKL+ L+  Y++++   K++ ++ +L+KYGG EH++    EL
Sbjct: 306 FAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNETQKELLDKYGGGEHMERPADEL 365

Query: 298 LLAQTEVFTRYKQ 260
           LLAQTE +  Y +
Sbjct: 366 LLAQTESYIEYNR 378


>AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical
           protein Y68A4B.1 protein.
          Length = 149

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = -1

Query: 300 CCWPRPKCSPATNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHS 121
           CCW    C      +G +VSG + Q A+ +Y +D+ ++ + +  GS+W   +    C  S
Sbjct: 15  CCWRSHSCGQCCAAEGAVVSGVQNQ-AELQYMQDSYVSLYGSETGSFWVGAKRTAACLES 73

Query: 120 FIKMS 106
            + ++
Sbjct: 74  QLTLT 78


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/48 (22%), Positives = 27/48 (56%)
 Frame = -3

Query: 442 HLXAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPREL 299
           H      +++ L+AHY+R Q+  +  V+Q  +E  G  + ++ + +++
Sbjct: 687 HTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQM 734



 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 135 KCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTD 31
           +CC+S ++   C+ E  ++V   +S  KKL  S D
Sbjct: 47  ECCNSTLRKEKCIAEFVESVKTVISKAKKLRLSRD 81


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -1

Query: 270 ATNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKC 130
           A N+DG + S  E    K+K  EDA+  NH  +W    R   W   C
Sbjct: 435 AINKDGLIPSRIENNNNKTKSTEDAIKMNH--LWDLNDRKSLWVPYC 479


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,574,882
Number of Sequences: 27780
Number of extensions: 258556
Number of successful extensions: 975
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)