Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_C21
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   5.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   7.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   9.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   9.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.4  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
 Frame = -3

Query: 406 QAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPRELLLAQTEVFTRYKQ----GRHARQR 239
           Q H++   Q    Q +Q   +    ++HLQ+  + ++  Q +      Q    G H RQ+
Sbjct: 167 QMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQ 226

Query: 238 GREATCQE*I*RGCSNKQPHHSLGLVLARRP 146
            +    Q  +    S +Q     G   A  P
Sbjct: 227 QQAQQHQGVVTSPLSQQQQAAPQGAASANLP 257


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 273 VNTSVWASSSSLGTDWRCS 329
           ++T+VW + +  G + RC+
Sbjct: 88  LHTTVWVAGAQRGNEQRCT 106


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 135 CSPTGRRASTSPRLWCGC 188
           C P  R  S SP L C C
Sbjct: 47  CLPAPRINSKSPLLSCAC 64


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 135 CSPTGRRASTSPRLWCGC 188
           C P  R  S SP L C C
Sbjct: 47  CLPAPRINSKSPLLSCAC 64


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 154 RRPVGLQVLSLLYKDVILRWRSRKD 80
           + PV L  +  L +  IL WR++KD
Sbjct: 590 KNPVQLWYVPSLDQVWILNWRNQKD 614


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 306 GSCCWPRPK 280
           GSC WPR K
Sbjct: 140 GSCYWPRGK 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,696
Number of Sequences: 438
Number of extensions: 3323
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)