Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_C16
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1613 + 38643833-38643974,38644054-38644190,38644828-386452... 50 2e-06
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 0.80
03_06_0212 + 32400982-32402055 31 0.80
12_02_1174 - 26696869-26698191 30 1.9
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 1.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.5
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.5
09_04_0078 + 14379720-14379786,14379903-14379974,14381093-143814... 29 3.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 4.3
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264... 29 4.3
07_01_0479 + 3606663-3607448 29 5.7
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 28 7.5
01_05_0490 + 22672241-22674679 28 7.5
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 9.9
08_02_0842 + 21754800-21754932,21755513-21756267 28 9.9
08_01_0059 - 394001-394708 28 9.9
03_02_0502 - 8934646-8934834,8934974-8935121,8935228-8935304,893... 28 9.9
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 9.9
>01_06_1613 +
38643833-38643974,38644054-38644190,38644828-38645207,
38645487-38645583,38645685-38645972,38646683-38647648
Length = 669
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 322 ADLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQG 212
A+ PPDPERWLPK ER++YR +R +R ++G+QG
Sbjct: 589 ANPGPPPDPERWLPKRERSSYRPKRKDKRAQVRGAQG 625
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.5 bits (68), Expect = 0.80
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +2
Query: 569 PLXPTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXX 748
P P+ + AG PP P APA P PP PG A R P
Sbjct: 335 PPAPSPSAAGAGSGPPPPPPPA----APAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALP 390
Query: 749 XGPXXXXXPP 778
GP PP
Sbjct: 391 GGPRARGPPP 400
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 578 PTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXXXGP 757
P A P PP P A A GPPP P P P G
Sbjct: 321 PPPPPAHPAAPAPPPPAPSP-SAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGR 379
Query: 758 XXXXXPPPXXP 790
PPP P
Sbjct: 380 GGGGPPPPALP 390
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +2
Query: 578 PTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXXXGP 757
P A AG PP P AP P P P G P GP
Sbjct: 309 PPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPA--APAAPRPPGP 366
Query: 758 XXXXXPPP 781
PPP
Sbjct: 367 GPGPPPPP 374
>03_06_0212 + 32400982-32402055
Length = 357
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -3
Query: 405 NNLPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSS 226
+ LP L ++ A A RR+Q K GC STSE SD+ + V S+
Sbjct: 108 DTLPSLDPAAFAAIPHAAADAAPTRRRSQQQQQQLSNKSGCSSTSETSKGSDKEVTVASA 167
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/74 (25%), Positives = 22/74 (29%)
Frame = +2
Query: 569 PLXPTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXX 748
P P R + P P K + P PPP P K V+ P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPS 184
Query: 749 XGPXXXXXPPPXXP 790
P PPP P
Sbjct: 185 LQPPSPPPPPPTRP 198
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 647 APAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXXXGPXXXXXPPPXXP 790
+P P PPP P + VK P P PPP P
Sbjct: 120 SPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRP 167
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 566 KPLXPTRAKAGPRXXGPPXPXKXX-FXXAPAXPGPPPXXP 682
+P+ P+ A P PP P K AP P PPP P
Sbjct: 217 EPVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPP 256
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +2
Query: 578 PTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXXXGP 757
PT A P PP P +P P PPP P A ++ P
Sbjct: 539 PTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCL 598
Query: 758 XXXXXPPPXXP 790
PPP P
Sbjct: 599 VPSPPPPPPPP 609
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 569 PLXPTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXP 703
P+ P R+ P PP P P P PPP P P
Sbjct: 610 PILPNRSVPPPPPPPPPLPNHSVLPPPPPPP-PPPSLPNRLVPPP 653
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +2
Query: 614 PPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXXXGPXXXXXPPP 781
PP P K P P P P P K P GP PPP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/72 (25%), Positives = 19/72 (26%), Gaps = 1/72 (1%)
Frame = +2
Query: 569 PLXPTRAKAGPRXXGPPXPXKXXFXXAPAXP-GPPPXXPGXXXXXPAKTRXVKXXXXPXX 745
P P P PP P P P GPPP P P + P
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 746 XXGPXXXXXPPP 781
PPP
Sbjct: 371 GGKKGGPPPPPP 382
>09_04_0078 +
14379720-14379786,14379903-14379974,14381093-14381497,
14382835-14382911,14383016-14383135,14383227-14383997,
14384933-14385146,14385269-14385735
Length = 730
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 381 LSWDRRRKRNASATANSR-RTQTSPNLPIR-KGGCQSTSELRTESDEALDVTSSRVAKEC 208
+ WD RR++ AS N+R R + N P R +GG ++ S++ ++ + T V E
Sbjct: 37 MGWDNRRRKQASTIMNARGRGARNGNGPNRGRGGGRAHSDVVVGANTTVLATRRWVGLEI 96
Query: 207 PPLP 196
+P
Sbjct: 97 DSVP 100
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 590 KAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXP 703
K PR PP A A P PPP PG P
Sbjct: 591 KRAPRVPRPPPAPSATANTASALPPPPPRPPGAPPPPP 628
>02_05_0101 -
25824093-25824112,25824734-25824842,25824927-25826429,
25826596-25827333,25827712-25827919,25828455-25830409,
25830868-25830960,25831044-25831100,25831189-25831272,
25831345-25831437,25831622-25832053,25833593-25833933,
25834663-25835215
Length = 2061
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = -3
Query: 378 SWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPL 199
SW RRR R SRR + GGC + R E V V P+
Sbjct: 126 SWRRRRSRTRQRRRRSRRRRRRRRTCGGGGGCGRGGDARGRPTELAKVVDGAVTPSLVPV 185
Query: 198 PR 193
R
Sbjct: 186 DR 187
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 569 PLXPTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPG 685
P+ P + + G GPP + P PG PP PG
Sbjct: 214 PMGPPQVRPG-MPGGPPPGMRPGMPPPPFRPGMPPPPPG 251
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 593 AGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXP 703
A R PP P F P GPPP P P
Sbjct: 3 AASRTWPPPTPSPPPFSSRPRVVGPPPPPPSDPPPPP 39
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Frame = +2
Query: 593 AGPRXXGPPXPXKXXFXXAP---AXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXXXGPXX 763
A P+ PP P P + P PPP P R V P P
Sbjct: 637 APPQPPPPPPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPL 696
Query: 764 XXXPPPXXP 790
PPP P
Sbjct: 697 PPPPPPPPP 705
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 739 GGXGXLYPXGFXXXXGXXPXXXGGRTGXG 653
GG G P GF G P GGR G G
Sbjct: 1105 GGRGGRGPGGFGGRGGGSPGGFGGRGGRG 1133
>08_02_0842 + 21754800-21754932,21755513-21756267
Length = 295
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 578 PTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXP 682
PT+ + G R G P P F +P+ P PP P
Sbjct: 54 PTQGRLGSRRSGHPFPPPSSFSASPS-PERPPAKP 87
>08_01_0059 - 394001-394708
Length = 235
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/74 (25%), Positives = 21/74 (28%)
Frame = +2
Query: 569 PLXPTRAKAGPRXXGPPXPXKXXFXXAPAXPGPPPXXPGXXXXXPAKTRXVKXXXXPXXX 748
P P R P PP P + +P PPP P P P
Sbjct: 3 PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPS----HPLAPPPPH 58
Query: 749 XGPXXXXXPPPXXP 790
P PPP P
Sbjct: 59 ISPPAPVPPPPSPP 72
>03_02_0502 -
8934646-8934834,8934974-8935121,8935228-8935304,
8935427-8935497,8935594-8935680,8935852-8936316,
8936406-8936880
Length = 503
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 307 PPDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTT 200
PP P +++P E +A+ K + DV+ ++ + TT
Sbjct: 25 PPTPPQYVPPEEPSAFAKLYAVAGDVVGRAKALLTT 60
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +2
Query: 566 KPLXPTRAKAGPRXXGPPXPXKXX--FXXAPAXPGPPPXXP 682
+P+ P+ A P PP P AP P PPP P
Sbjct: 341 RPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPP 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,935
Number of Sequences: 37544
Number of extensions: 365569
Number of successful extensions: 1584
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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