Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_C13
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 133 1e-31
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 121 6e-28
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 88 7e-18
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 82 4e-16
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 80 2e-15
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 80 2e-15
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 78 6e-15
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 34 0.094
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 32 0.38
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 32 0.38
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 1.5
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 30 2.0
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.0
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 2.0
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 2.0
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 3.5
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 4.7
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 28 6.2
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 28 6.2
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 28 6.2
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 8.1
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 28 8.1
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 28 8.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 133 bits (322), Expect = 1e-31
Identities = 61/109 (55%), Positives = 80/109 (73%)
Frame = -2
Query: 562 TXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTMXXXXXXXKXX 383
T DKG SK++ ERMVNEAEKY+ +D+ QK+ AKN LESY F++K T+ K
Sbjct: 505 TNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKIS 564
Query: 382 XXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
DK+ I DKC + +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 565 PEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 121 bits (291), Expect = 6e-28
Identities = 56/109 (51%), Positives = 76/109 (69%)
Frame = -2
Query: 562 TXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTMXXXXXXXKXX 383
T DK SK++ ERMVNEAEKY+ +D+ QK+ AKN LESY F++K T+ K
Sbjct: 505 TNDKDRFSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKIS 564
Query: 382 XXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
DK+ I DKC + +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 565 PEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/107 (38%), Positives = 66/107 (61%)
Frame = -2
Query: 556 DKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTMXXXXXXXKXXXX 377
+KG ++ + +RMV+EA+++ ED +Q+E QA+N LE+Y F +K +
Sbjct: 507 EKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQALDEYSSKLSTE-- 564
Query: 376 DKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
D + +T++WLDSN LA+K+E E K KEL+ +C I+TKM+Q
Sbjct: 565 DASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/107 (38%), Positives = 66/107 (61%)
Frame = -2
Query: 556 DKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTMXXXXXXXKXXXX 377
+KG ++ + +RMV+EA+++ ED +Q+E QA+N LE+Y F +K +
Sbjct: 507 EKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQALDEYSSKLSTE-- 564
Query: 376 DKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
D + +T++WLDSN LA+K+E E K KEL+ +C I+TKM+Q
Sbjct: 565 DASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/107 (38%), Positives = 64/107 (59%)
Frame = -2
Query: 556 DKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTMXXXXXXXKXXXX 377
+KG S+ + +RMVNEA+++ ED Q++ ++N LE+Y F +K +
Sbjct: 507 EKGRLSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQVKQALEEHGSLLSAE-- 564
Query: 376 DKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
D + D DT++W++ N LADK+E E K KEL+ IC I+TKM+Q
Sbjct: 565 DAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = -2
Query: 562 TXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTM-XXXXXXXKX 386
T D+ S E+ ERM+N+AEK+ +D K K+ +A+N LESY +++K + K
Sbjct: 532 TNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKL 591
Query: 385 XXXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 592 DEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Frame = -2
Query: 562 TXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTM-XXXXXXXKX 386
T D+ S E+ E M+N+AEK+ +D K K+ +A+N LESY +++K + K
Sbjct: 532 TNDQNRLSPEDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKL 591
Query: 385 XXXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 236
DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 592 DEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -2
Query: 562 TXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTM-XXXXXXXKX 386
T D S E+ ERM+N+A+K+ +D QKE +++N LE+Y + MK + K
Sbjct: 529 TNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKL 588
Query: 385 XXXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 239
DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 589 TDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 78.2 bits (184), Expect = 6e-15
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -2
Query: 562 TXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTM-XXXXXXXKX 386
T D S E+ ERM+N+A+K+ +D QKE +++N LE+Y + +K + K
Sbjct: 160 TNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQIKTQIADKEKLGGKL 219
Query: 385 XXXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 239
DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 220 TDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 34.3 bits (75), Expect = 0.094
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = -2
Query: 532 EXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSM--KXTMXXXXXXXKXXXXDKQTIL 359
+ ++ N + + D ++K AKN+LE Y + M K + + +++L
Sbjct: 552 DVQKFHNLELQMQESDAREKAKADAKNSLEEYVYEMRDKVSDQYAEFITPAAADEFRSVL 611
Query: 358 DKCXDTIKWL-DSNQLADKEEYEHKQKELEGICNPIITK 245
D WL D + A+++ YE + EL+ + P++ +
Sbjct: 612 TSTED---WLYDEGEDAERDVYEKRLSELKAVGTPVVER 647
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 192 EHPEPEVPPPGLEALAPPSRRSIKPTF 112
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 192 EHPEPEVPPPGLEALAPPSRRSIKPTF 112
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 556 DKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALES 440
D K + + +V EAEK + E DK+KE K A ES
Sbjct: 875 DLAKDGKIDIDTIVEEAEKKKAEQDKKKEKKSTKKANES 913
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPT 91
P P + +A P P PPP L+A PP +K + + PT
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 204 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 103
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 204 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 103
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 222 SPEVCRASRAEH-PEPEVPPPGLEALAPP 139
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 222 SPEVCRASRAEH-PEPEVPPPGLEALAPP 139
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 240 TRVPEESPEVCRASRAEHPEPE---VPPPGLEALAPPSRRSI 124
+R P SP ++ HP P + PPGLE L+ R+ I
Sbjct: 1408 SRQPSRSPSFVNPQQSFHPIPSFEPIVPPGLEDLSEEERQKI 1449
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKP 94
P E P ++ P P PP PP+RR P TR+P
Sbjct: 223 PSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRP 268
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/101 (22%), Positives = 42/101 (41%)
Frame = -2
Query: 571 SPXTXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAKNALESYXFSMKXTMXXXXXXX 392
+P +K KEE ++ +E +K +DDK+ + + K+ + +
Sbjct: 63 APKVEEKKEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDE 122
Query: 391 KXXXXDKQTILDKCXDTIKWLDSNQLADKEEYEHKQKELEG 269
K K+ +K D K D ++ DK+E E K + G
Sbjct: 123 KKEDEKKEESKEKSKDEEKKKD--EVKDKKEDEKKDDKKPG 161
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 601 EKSXXXGXTRSPXTXDKGXXSKEEXERMVNEAEKYRNEDDKQKETXQAK 455
EKS +S +K KEE E E ++ + EDDK+ E K
Sbjct: 73 EKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEK 121
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +1
Query: 85 VTGRFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 237
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +1
Query: 85 VTGRFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 237
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +1
Query: 85 VTGRFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 237
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 198 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 103
R E P P P G + A +RR I+P+ TT
Sbjct: 308 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 339
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 198 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 103
R E P P P G + A +RR I+P+ TT
Sbjct: 551 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 582
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 204 ASRAEHPEPEVPPPGLEALAPPSRRSIKPTF-HTTRKPTCNNHL 76
AS + P P P + + +R+ +KPT ++T++ T NN++
Sbjct: 37 ASTSSAAPPAPPKPVIPVMFSQNRQPMKPTMNNSTKQSTINNYI 80
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 204 ASRAEHPEPEVPPPGLEALAPPSRRSIKPTF-HTTRKPTCNNHL 76
AS + P P P + + +R+ +KPT ++T++ T NN++
Sbjct: 38 ASTSSAAPPAPPKPVIPVMFSQNRQPMKPTMNNSTKQSTINNYI 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,523,564
Number of Sequences: 27780
Number of extensions: 195847
Number of successful extensions: 1001
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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