Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_C06
(793 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 46 3e-05
02_05_1194 - 34881450-34881593,34882023-34882220,34882522-348826... 33 0.34
04_04_0475 + 25500470-25500609,25500697-25500794,25502806-255029... 32 0.45
10_08_0299 - 16607152-16607322,16607465-16607785,16607870-166081... 29 3.2
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 29 5.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.4
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 28 9.8
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 28 9.8
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = -2
Query: 444 GYY*AXAAEDSXR*XMGXGGRLKXXKTIQ-LXXKYAIKELCFDXSGTYLAIAGTDVRVY- 271
GY+ A AA D + + +L+ +TI + FD SG+YLA+ G+D RVY
Sbjct: 376 GYFLATAALDGVK--LWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQ 433
Query: 270 ---LCRQWQELXVFND--HTASATGVRFGKNAXNFVSTSMXRTLKLYG 142
+ +W + D T T V+FG +A SM R L+++G
Sbjct: 434 VANVKLEWNLVKTLPDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFG 481
>02_05_1194 -
34881450-34881593,34882023-34882220,34882522-34882638,
34882753-34882908,34883192-34883341,34883418-34883527,
34883589-34883730,34883836-34884054,34887004-34887099,
34887187-34887489,34887575-34887624,34888003-34888114,
34888204-34888279,34888389-34888684,34888763-34888872,
34889071-34889120,34890439-34890488,34890636-34890816,
34890901-34890932
Length = 863
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTDVRVYLCRQ--WQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F G LA AG + + L +Q +H+ T VRF N+ ++S RT+K
Sbjct: 594 FSSDGKILASAGHEKKAVLWNMDTFQSQYTSEEHSLIITDVRFRPNSSQLATSSFDRTIK 653
Query: 150 LY 145
L+
Sbjct: 654 LW 655
>04_04_0475 +
25500470-25500609,25500697-25500794,25502806-25502915,
25502998-25503293,25503399-25503474,25503577-25503688,
25503955-25504004,25504090-25504392,25504446-25504547,
25505463-25505635,25505745-25505917,25505997-25506106,
25506180-25506329,25506726-25506881,25507000-25507116,
25507277-25507474,25507809-25507952
Length = 835
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTDVRVYLCRQ--WQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F G LA AG + + L +Q +H T VRF N+ ++S RT+K
Sbjct: 566 FSSDGKILASAGHEKKAVLWNMETFQTQYTAEEHAVIITDVRFRPNSNQLATSSFDRTIK 625
Query: 150 LY 145
L+
Sbjct: 626 LW 627
>10_08_0299 -
16607152-16607322,16607465-16607785,16607870-16608121,
16608298-16608435,16608544-16608651,16608814-16609014,
16609109-16609233,16609252-16609321,16609919-16610455
Length = 640
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 252 ELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLYGI 139
++ V HT TGV+F + +S SM TLK++ +
Sbjct: 360 DIHVEKTHTEDITGVKFSTDGQILLSRSMDSTLKIWDL 397
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = -2
Query: 342 AIKELC--FDXSGTYLAIAGTDVRVYL-CRQ--WQELXVFNDHTASATGVRFGKNAXNFV 178
A K C F G LA G D +V L C + + +H+A T VRF +
Sbjct: 604 ATKVTCCHFSSDGKLLATGGHDKKVLLWCTEPALKPTSSLEEHSALITDVRFSPSMSRLA 663
Query: 177 STSMXRTLKLY 145
++S +T++++
Sbjct: 664 TSSFDKTVRVW 674
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 417 PQQXXLNSTQASPXTEX--DNXPWAPPPXPXGPXXPXPR 527
P +NS+Q P P APPP P P P PR
Sbjct: 96 PPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPR 134
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 300 AIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLY 145
A AG D +RVY + L V H+AS V F ++ S S T+ L+
Sbjct: 327 ATAGWDHRIRVYSYSKGNALAVLKYHSASCNAVTFSSDSKLLASCSADTTVALW 380
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -2
Query: 324 FDXSGTYLAIAGTDVRVYLCRQWQELXV---FNDHTASATGVRFGKNAXNFVSTSMXRTL 154
F G LA AG + +V+L L + +HT T +RF N+ ++S T+
Sbjct: 387 FSTDGKLLASAGHEKKVFLWNM-DNLNMDTKIEEHTNFITDIRFKPNSTQLATSSSDGTV 445
Query: 153 KLY 145
+L+
Sbjct: 446 RLW 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,574,582
Number of Sequences: 37544
Number of extensions: 199661
Number of successful extensions: 819
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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