Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_C06
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 101 4e-21
BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 101 4e-21
BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 101 4e-21
AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein ... 101 4e-21
BC119693-1|AAI19694.1| 441|Homo sapiens WDR51A protein protein. 36 0.17
BC119692-1|AAI19693.1| 407|Homo sapiens WD repeat domain 51A pr... 36 0.17
BC110877-1|AAI10878.1| 359|Homo sapiens WDR51A protein protein. 36 0.17
BC007417-1|AAH07417.2| 396|Homo sapiens WDR51A protein protein. 36 0.17
AK075289-1|BAC11525.1| 407|Homo sapiens protein ( Homo sapiens ... 36 0.17
X95525-1|CAA64777.1| 799|Homo sapiens hTAFII100 protein. 35 0.39
U80191-1|AAC51215.1| 800|Homo sapiens TFIID subunit TAFII100 pr... 35 0.39
U75309-1|AAC50902.1| 801|Homo sapiens TBP-associated factor pro... 35 0.39
BC052268-1|AAH52268.2| 800|Homo sapiens TAF5 RNA polymerase II,... 35 0.39
AL591408-4|CAI16747.1| 800|Homo sapiens TAF5 RNA polymerase II,... 35 0.39
AK223615-1|BAD97335.1| 803|Homo sapiens Transcription initiatio... 35 0.39
BC086311-1|AAH86311.1| 460|Homo sapiens WD repeat domain 8 prot... 31 3.6
BC002611-1|AAH02611.1| 435|Homo sapiens WDR8 protein protein. 31 3.6
AL513320-4|CAI14337.1| 304|Homo sapiens WD repeat domain 8 prot... 31 3.6
AL513320-3|CAI14336.1| 435|Homo sapiens WD repeat domain 8 prot... 31 3.6
AL513320-2|CAI14335.1| 460|Homo sapiens WD repeat domain 8 prot... 31 3.6
AL136528-9|CAI19130.1| 304|Homo sapiens WD repeat domain 8 prot... 31 3.6
AL136528-8|CAI19129.1| 435|Homo sapiens WD repeat domain 8 prot... 31 3.6
AL136528-7|CAI19128.1| 460|Homo sapiens WD repeat domain 8 prot... 31 3.6
AK000437-1|BAA91164.1| 460|Homo sapiens protein ( Homo sapiens ... 31 3.6
AB034912-1|BAA92312.1| 460|Homo sapiens protein ( Homo sapiens ... 31 3.6
>BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 101 bits (241), Expect = 4e-21
Identities = 48/102 (47%), Positives = 65/102 (63%)
Frame = -2
Query: 444 GYY*AXAAEDSXR*XMGXGGRLKXXKTIQLXXKYAIKELCFDXSGTYLAIAGTDVRVYLC 265
GYY A AA+DS + +LK KT+QL + +K L FD SGTYLA+ GTDV++Y+C
Sbjct: 404 GYYLATAADDSSV-KLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYIC 462
Query: 264 RQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLYGI 139
+QW E+ F +H+ TGV FG +A ST M R+LK Y +
Sbjct: 463 KQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 101 bits (241), Expect = 4e-21
Identities = 48/102 (47%), Positives = 65/102 (63%)
Frame = -2
Query: 444 GYY*AXAAEDSXR*XMGXGGRLKXXKTIQLXXKYAIKELCFDXSGTYLAIAGTDVRVYLC 265
GYY A AA+DS + +LK KT+QL + +K L FD SGTYLA+ GTDV++Y+C
Sbjct: 404 GYYLATAADDSSV-KLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYIC 462
Query: 264 RQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLYGI 139
+QW E+ F +H+ TGV FG +A ST M R+LK Y +
Sbjct: 463 KQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 101 bits (241), Expect = 4e-21
Identities = 48/102 (47%), Positives = 65/102 (63%)
Frame = -2
Query: 444 GYY*AXAAEDSXR*XMGXGGRLKXXKTIQLXXKYAIKELCFDXSGTYLAIAGTDVRVYLC 265
GYY A AA+DS + +LK KT+QL + +K L FD SGTYLA+ GTDV++Y+C
Sbjct: 404 GYYLATAADDSSV-KLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYIC 462
Query: 264 RQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLYGI 139
+QW E+ F +H+ TGV FG +A ST M R+LK Y +
Sbjct: 463 KQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein
NMP200 protein.
Length = 504
Score = 101 bits (241), Expect = 4e-21
Identities = 48/102 (47%), Positives = 65/102 (63%)
Frame = -2
Query: 444 GYY*AXAAEDSXR*XMGXGGRLKXXKTIQLXXKYAIKELCFDXSGTYLAIAGTDVRVYLC 265
GYY A AA+DS + +LK KT+QL + +K L FD SGTYLA+ GTDV++Y+C
Sbjct: 404 GYYLATAADDSSV-KLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYIC 462
Query: 264 RQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLYGI 139
+QW E+ F +H+ TGV FG +A ST M R+LK Y +
Sbjct: 463 KQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>BC119693-1|AAI19694.1| 441|Homo sapiens WDR51A protein protein.
Length = 441
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVS 175
K A+ + F SG LA D VR+++ E VF HTA+ V F + +FV+
Sbjct: 95 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 154
Query: 174 TSMXRTLKLY 145
S +T+K++
Sbjct: 155 ASDDKTVKVW 164
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F SGT +A AG D V+V+ R + L + H+A+ G+ F + ++ S TLK
Sbjct: 229 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 288
Query: 150 L 148
+
Sbjct: 289 I 289
>BC119692-1|AAI19693.1| 407|Homo sapiens WD repeat domain 51A
protein.
Length = 407
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVS 175
K A+ + F SG LA D VR+++ E VF HTA+ V F + +FV+
Sbjct: 61 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 174 TSMXRTLKLY 145
S +T+K++
Sbjct: 121 ASDDKTVKVW 130
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F SGT +A AG D V+V+ R + L + H+A+ G+ F + ++ S TLK
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 254
Query: 150 L 148
+
Sbjct: 255 I 255
>BC110877-1|AAI10878.1| 359|Homo sapiens WDR51A protein protein.
Length = 359
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVS 175
K A+ + F SG LA D VR+++ E VF HTA+ V F + +FV+
Sbjct: 61 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 174 TSMXRTLKLY 145
S +T+K++
Sbjct: 121 ASDDKTVKVW 130
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F SGT +A AG D V+V+ R + L + H+A+ G+ F + ++ S TLK
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 254
Query: 150 L 148
+
Sbjct: 255 I 255
>BC007417-1|AAH07417.2| 396|Homo sapiens WDR51A protein protein.
Length = 396
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVS 175
K A+ + F SG LA D VR+++ E VF HTA+ V F + +FV+
Sbjct: 50 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 109
Query: 174 TSMXRTLKLY 145
S +T+K++
Sbjct: 110 ASDDKTVKVW 119
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F SGT +A AG D V+V+ R + L + H+A+ G+ F + ++ S TLK
Sbjct: 184 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 243
Query: 150 L 148
+
Sbjct: 244 I 244
>AK075289-1|BAC11525.1| 407|Homo sapiens protein ( Homo sapiens
cDNA FLJ90808 fis, clone Y79AA1000777, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 407
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVS 175
K A+ + F SG LA D VR+++ E VF HTA+ V F + +FV+
Sbjct: 61 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 174 TSMXRTLKLY 145
S +T+K++
Sbjct: 121 ASDDKTVKVW 130
Score = 34.7 bits (76), Expect = 0.39
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -2
Query: 324 FDXSGTYLAIAGTD--VRVYLCRQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLK 151
F SGT +A AG D V+V+ R ++ L + H+A+ G+ F + ++ S TLK
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 254
Query: 150 L 148
+
Sbjct: 255 I 255
>X95525-1|CAA64777.1| 799|Homo sapiens hTAFII100 protein.
Length = 799
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTDVRVYLCRQWQELXV--FNDHTASATGVRFGKNAXNFVS 175
K I L F +G +LA TD RV L L V HT + +RF ++ S
Sbjct: 669 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 174 TSMXRTLKLY 145
SM T++L+
Sbjct: 729 GSMDNTVRLW 738
>U80191-1|AAC51215.1| 800|Homo sapiens TFIID subunit TAFII100
protein.
Length = 800
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTDVRVYLCRQWQELXV--FNDHTASATGVRFGKNAXNFVS 175
K I L F +G +LA TD RV L L V HT + +RF ++ S
Sbjct: 669 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 174 TSMXRTLKLY 145
SM T++L+
Sbjct: 729 GSMDNTVRLW 738
>U75309-1|AAC50902.1| 801|Homo sapiens TBP-associated factor
protein.
Length = 801
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTDVRVYLCRQWQELXV--FNDHTASATGVRFGKNAXNFVS 175
K I L F +G +LA TD RV L L V HT + +RF ++ S
Sbjct: 670 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 729
Query: 174 TSMXRTLKLY 145
SM T++L+
Sbjct: 730 GSMDNTVRLW 739
>BC052268-1|AAH52268.2| 800|Homo sapiens TAF5 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 100kD
protein.
Length = 800
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTDVRVYLCRQWQELXV--FNDHTASATGVRFGKNAXNFVS 175
K I L F +G +LA TD RV L L V HT + +RF ++ S
Sbjct: 669 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 174 TSMXRTLKLY 145
SM T++L+
Sbjct: 729 GSMDNTVRLW 738
>AL591408-4|CAI16747.1| 800|Homo sapiens TAF5 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 100kD
protein.
Length = 800
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTDVRVYLCRQWQELXV--FNDHTASATGVRFGKNAXNFVS 175
K I L F +G +LA TD RV L L V HT + +RF ++ S
Sbjct: 669 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 174 TSMXRTLKLY 145
SM T++L+
Sbjct: 729 GSMDNTVRLW 738
>AK223615-1|BAD97335.1| 803|Homo sapiens Transcription initiation
factor TFIID subunit 5 variant protein.
Length = 803
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTDVRVYLCRQWQELXV--FNDHTASATGVRFGKNAXNFVS 175
K I L F +G +LA TD RV L L V HT + +RF ++ S
Sbjct: 672 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 731
Query: 174 TSMXRTLKLY 145
SM T++L+
Sbjct: 732 GSMDNTVRLW 741
>BC086311-1|AAH86311.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>BC002611-1|AAH02611.1| 435|Homo sapiens WDR8 protein protein.
Length = 435
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AL513320-4|CAI14337.1| 304|Homo sapiens WD repeat domain 8
protein.
Length = 304
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AL513320-3|CAI14336.1| 435|Homo sapiens WD repeat domain 8
protein.
Length = 435
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AL513320-2|CAI14335.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AL136528-9|CAI19130.1| 304|Homo sapiens WD repeat domain 8
protein.
Length = 304
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AL136528-8|CAI19129.1| 435|Homo sapiens WD repeat domain 8
protein.
Length = 435
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AL136528-7|CAI19128.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AK000437-1|BAA91164.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ20430 fis, clone KAT03672. ).
Length = 460
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
>AB034912-1|BAA92312.1| 460|Homo sapiens protein ( Homo sapiens
mRNA, complete cds, WD-repeat like sequence. ).
Length = 460
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 348 KYAIKELCFDXSGTYLAIAGTD-----VRVYLCRQWQELXVFNDHTASATGVRFGKN 193
K ++ + F G Y+A+A V +++C WQ L F+ T TG+ + N
Sbjct: 133 KACLQGITFTRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPN 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,431,215
Number of Sequences: 237096
Number of extensions: 1075942
Number of successful extensions: 3741
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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