Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_C06
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    72   4e-13
U29380-1|AAA68740.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC024838-7|AAF60820.1|  381|Caenorhabditis elegans Hypothetical ...    29   3.8  
AC024838-3|AAF60821.1|  381|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z78544-3|CAB01760.1|  395|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 37/100 (37%), Positives = 56/100 (56%)
 Frame = -2

Query: 444 GYY*AXAAEDSXR*XMGXGGRLKXXKTIQLXXKYAIKELCFDXSGTYLAIAGTDVRVYLC 265
           GYY A  +ED     +    +LK  KT     K  I  L FD +GT+L I G  V+V   
Sbjct: 392 GYYLATGSEDGEV-KLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGIGGQKVQVLHV 450

Query: 264 RQWQELXVFNDHTASATGVRFGKNAXNFVSTSMXRTLKLY 145
           + W E+   +DH+   TGVRFG+NA + V+ S+ ++L+++
Sbjct: 451 KSWSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVF 490


>U29380-1|AAA68740.1|  346|Caenorhabditis elegans Hypothetical
           protein ZK546.7 protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +3

Query: 435 NSTQASPXTEXDNXPWAPPPXPXGPXXPXP 524
           N     P  E +N P  PPP P  P  P P
Sbjct: 133 NCVGGPPYCECENCPKLPPPPPIPPPGPPP 162


>AC024838-7|AAF60820.1|  381|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.2 protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +3

Query: 435 NSTQASPXTEXDNXPWAPPPXPXGPXXPXP 524
           N     P  E +N P  PPP P  P  P P
Sbjct: 168 NCIGGPPHCECENCPKPPPPPPIPPPGPPP 197


>AC024838-3|AAF60821.1|  381|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.3 protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +3

Query: 435 NSTQASPXTEXDNXPWAPPPXPXGPXXPXP 524
           N     P  E +N P  PPP P  P  P P
Sbjct: 168 NCIGGPPHCECENCPKPPPPPPIPPPGPPP 197


>Z78544-3|CAB01760.1|  395|Caenorhabditis elegans Hypothetical
           protein K04G11.4 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -2

Query: 339 IKELCFDXSGTYLAIAGTD--VRVYLCRQWQEL-XVFNDHTASATGVRFGKNAXNFVSTS 169
           +  +CF+  G YLA    D  VR++       +  + ++     T V+F  N    ++++
Sbjct: 235 VSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASN 294

Query: 168 MXRTLKLY 145
           +  TLKL+
Sbjct: 295 LNNTLKLW 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,164,061
Number of Sequences: 27780
Number of extensions: 152099
Number of successful extensions: 450
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)