Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_C05
(947 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.042
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.042
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.042
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.91
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.9
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 29 4.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.4
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 29 6.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.042
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +2
Query: 698 PXQSHHXPXPPRXTXXPTRPPDXXPXAXPX--ERXNPRQGRPPTSXXXRGXXPXXKKXPX 871
P + P PPR T P PP P P PR G PP RG P P
Sbjct: 257 PPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 872 XAXAXPGGXPXETSPP 919
A P + PP
Sbjct: 316 QAGGSPPPAGTGSPPP 331
Score = 32.7 bits (71), Expect = 0.39
Identities = 25/94 (26%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +2
Query: 644 PTNPXXRDXXXPXXXXKNPXQSHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQ--GRP 817
P P P P + P PPR P PP + P P Q G P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG--SPPTGSLPPPQAGGSP 321
Query: 818 PTSXXXRGXXPXXKKXPXXAXAXPGGXPXETSPP 919
P + P +K + P G P SPP
Sbjct: 322 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/80 (25%), Positives = 26/80 (32%)
Frame = +2
Query: 677 PXXXXKNPXQSHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXX 856
P + +S P PR + PP P R +P G PPT R
Sbjct: 390 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAP 449
Query: 857 KKXPXXAXAXPGGXPXETSP 916
+ P + P G P P
Sbjct: 450 EDRP--TGSPPTGSPPTGRP 467
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.042
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +2
Query: 698 PXQSHHXPXPPRXTXXPTRPPDXXPXAXPX--ERXNPRQGRPPTSXXXRGXXPXXKKXPX 871
P + P PPR T P PP P P PR G PP RG P P
Sbjct: 278 PPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 872 XAXAXPGGXPXETSPP 919
A P + PP
Sbjct: 337 QAGGSPPPAGTGSPPP 352
Score = 32.7 bits (71), Expect = 0.39
Identities = 25/94 (26%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +2
Query: 644 PTNPXXRDXXXPXXXXKNPXQSHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQ--GRP 817
P P P P + P PPR P PP + P P Q G P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG--SPPTGSLPPPQAGGSP 342
Query: 818 PTSXXXRGXXPXXKKXPXXAXAXPGGXPXETSPP 919
P + P +K + P G P SPP
Sbjct: 343 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/80 (25%), Positives = 26/80 (32%)
Frame = +2
Query: 677 PXXXXKNPXQSHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXX 856
P + +S P PR + PP P R +P G PPT R
Sbjct: 411 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAP 470
Query: 857 KKXPXXAXAXPGGXPXETSP 916
+ P + P G P P
Sbjct: 471 EDRP--TGSPPTGSPPTGRP 488
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.042
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +2
Query: 698 PXQSHHXPXPPRXTXXPTRPPDXXPXAXPX--ERXNPRQGRPPTSXXXRGXXPXXKKXPX 871
P + P PPR T P PP P P PR G PP RG P P
Sbjct: 263 PPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 872 XAXAXPGGXPXETSPP 919
A P + PP
Sbjct: 322 QAGGSPPPAGTGSPPP 337
Score = 32.7 bits (71), Expect = 0.39
Identities = 25/94 (26%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +2
Query: 644 PTNPXXRDXXXPXXXXKNPXQSHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQ--GRP 817
P P P P + P PPR P PP + P P Q G P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG--SPPTGSLPPPQAGGSP 327
Query: 818 PTSXXXRGXXPXXKKXPXXAXAXPGGXPXETSPP 919
P + P +K + P G P SPP
Sbjct: 328 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/80 (25%), Positives = 26/80 (32%)
Frame = +2
Query: 677 PXXXXKNPXQSHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXX 856
P + +S P PR + PP P R +P G PPT R
Sbjct: 396 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAP 455
Query: 857 KKXPXXAXAXPGGXPXETSP 916
+ P + P G P P
Sbjct: 456 EDRP--TGSPPTGSPPTGRP 473
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.91
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +2
Query: 707 SHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXXKKXPXXAXAX 886
S P PP+ T P PP P E N + RPP G P +
Sbjct: 61 SRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASR-RPPPPPKGTGTPPPPPTGEPQDLSG 119
Query: 887 PGGXPXETSPP 919
G PP
Sbjct: 120 EGNASRRPPPP 130
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +2
Query: 707 SHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXXKKXPXXAXAX 886
S P PP+ T PT PP P E R RPP G P +
Sbjct: 217 SRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASR--RPPPPPKGTGSPPPPPTGEPQDLSG 274
Query: 887 PGGXPXETSPP 919
G PP
Sbjct: 275 EGNASRRPPPP 285
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 707 SHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXXKK-XPXXAXA 883
S P PP+ T P PP P E R RPP G P P A
Sbjct: 30 SRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASR--RPPPPPKGTGTPPPPPTGEPQDLSA 87
Query: 884 XPGGXPXETSPP 919
G PP
Sbjct: 88 EEGNASRRPPPP 99
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/71 (26%), Positives = 21/71 (29%)
Frame = +2
Query: 707 SHHXPXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXXKKXPXXAXAX 886
S P PP+ T P PP P E R RPP G P +
Sbjct: 124 SRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASR--RPPPPPKGTGSPPPPPTGEPQDLST 181
Query: 887 PGGXPXETSPP 919
G PP
Sbjct: 182 EGNASRRPPPP 192
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 583 TDPXXTTPPXTTQXXHHPXTTHQPXXAXXXEXXGXXQKPXAKPP 714
T+P T PP TT P TT P + P PP
Sbjct: 405 TEPPKTEPPKTTPPKTEPPTTEPPNIPYCWQQQSRLFAPSPPPP 448
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = +1
Query: 583 TDPXXTTPPXTTQXXHHPXTTHQPXXAXXXEXXGXXQKPXAKPPXPXXPTAD 738
T+P T PP T P T P + P PP PT +
Sbjct: 375 TEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPTTE 426
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 374 AXRTTPPPQXRXXXXTKXKTRTKXPPXPXP 463
A RTT PP TK T T PP P P
Sbjct: 813 APRTTVPPTTVTVRTTKTTTTTTTPPPPPP 842
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/72 (27%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +2
Query: 719 PXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXXKKXPXXAXAXPG-- 892
P PP P +P P + P G+PPT+ P K P PG
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQPGVP--GKPPTAPCEPTTPPPCKPCPQGPPGPPGPP 163
Query: 893 ---GXPXETSPP 919
G P E P
Sbjct: 164 GAPGDPGEAGTP 175
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +1
Query: 232 PXXXQXDRXRAGXNQKTXXNKSXGGPXTTXPTXXXHRGGXPXXTTTXRAQDHPPPP 399
P R +A + KS G P GG P + A PPPP
Sbjct: 331 PDLQTPPRQQASAKPQASPAKSAGAPQLPQKVPLFPSGGAPSSPSAPEAPSEPPPP 386
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/72 (27%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +2
Query: 719 PXPPRXTXXPTRPPDXXPXAXPXERXNPRQGRPPTSXXXRGXXPXXKKXPXXAXAXPG-- 892
P PP P +P P + P G+PPT+ P K P PG
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQPGVP--GKPPTAPCEPTTPPPCKPCPQGPPGPPGPP 163
Query: 893 ---GXPXETSPP 919
G P E P
Sbjct: 164 GAPGDPGEAGTP 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.130 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,573,856
Number of Sequences: 27780
Number of extensions: 171071
Number of successful extensions: 392
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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