Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_C01
         (780 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA...    34   3.5  
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_Q2UQ79 Cluster: Von Willebrand factor and related coagu...    33   8.0  
UniRef50_O94532 Cluster: Formin-3; n=1; Schizosaccharomyces pomb...    33   8.0  

>UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA,
            isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG11321-PA, isoform A - Tribolium castaneum
          Length = 2084

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 215  CTRCSSCFXNTPCSRRMVCPGTR*VE-HNCRR 123
            C +CSS F   P  RR+VCP  + V   NCRR
Sbjct: 1787 CVKCSSGFIANPRQRRLVCPDCKSVTCANCRR 1818


>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1411

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -2

Query: 233 RYRPACCTRCSSCFXNTPC--SRRMVCPGTR*VEHNCRRTSRRH 108
           + RP  CTRC   +    C  S R +  G+   EHNCRR    H
Sbjct: 367 KQRPLQCTRCYCFYDTRACRSSERCISCGSSKQEHNCRRGGAVH 410


>UniRef50_Q2UQ79 Cluster: Von Willebrand factor and related
           coagulation proteins; n=2; Aspergillus|Rep: Von
           Willebrand factor and related coagulation proteins -
           Aspergillus oryzae
          Length = 1014

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
 Frame = +3

Query: 531 GXNPRSXXPXPTXERXT--RPPXAXKXXRXPXQXXPXGRXPPEXXPXHPXXCXEXXXXQK 704
           G  P    P PT E+ T   PP        P    P G  PP   P            Q 
Sbjct: 241 GTEPPHTKPQPTQEKPTGTEPPHTKPTGTEPPHTKPTGTEPPHTKPTGTEPPHTKPPHQT 300

Query: 705 PPPH 716
            PPH
Sbjct: 301 EPPH 304


>UniRef50_O94532 Cluster: Formin-3; n=1; Schizosaccharomyces
           pombe|Rep: Formin-3 - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 1461

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 17/55 (30%), Positives = 18/55 (32%)
 Frame = +2

Query: 608 PXPGTXXXXXXTPTGXXXPASXXLXXXTXPPKAXPPHRVXXXXXPPPPXXPPXLS 772
           P P        TP     P          PP   PP  V     PPPP  PP +S
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.314    0.133    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,057,419
Number of Sequences: 1657284
Number of extensions: 6956417
Number of successful extensions: 20870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18155
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)