Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_B24
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000533-1|CAA04166.1| 265|Caenorhabditis elegans CEH-25 homeob... 32 0.49
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 32 0.49
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 32 0.49
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 32 0.49
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 32 0.49
AC006692-6|AAM48547.1| 153|Caenorhabditis elegans Uncoordinated... 32 0.49
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 32 0.49
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 32 0.49
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 32 0.49
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 32 0.49
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 32 0.49
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 30 1.5
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 29 3.5
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 29 3.5
AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine re... 28 8.0
>AJ000533-1|CAA04166.1| 265|Caenorhabditis elegans CEH-25 homeobox
protein protein.
Length = 265
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 138 LQVNNWFINARRRIVQPMI 156
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 400 LQVNNWFINARRRIVQPMI 418
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 396 LQVNNWFINARRRIVQPMI 414
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 437 LQVNNWFINARRRIVQPMI 455
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 433 LQVNNWFINARRRIVQPMI 451
>AC006692-6|AAM48547.1| 153|Caenorhabditis elegans Uncoordinated
protein 62, isoform c protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 26 LQVNNWFINARRRIVQPMI 44
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 363 LQVNNWFINARRRIVQPMI 381
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 400 LQVNNWFINARRRIVQPMI 418
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 396 LQVNNWFINARRRIVQPMI 414
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 437 LQVNNWFINARRRIVQPMI 455
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 733 LQVCNWFINARRRXLPEMI 677
LQV NWFINARRR + MI
Sbjct: 433 LQVNNWFINARRRIVQPMI 451
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -2
Query: 543 DPDRSAEQEYTDGLLVYRSEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPEDKE 364
D D + E EY D E D+ D EE + E+E +Y+ + + YG E++E
Sbjct: 811 DSDETDESEYYDDEEEIEDESDEYED-EEYWDEEIEYEDEEEYEYEDEEVLEEYGDEEEE 869
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -2
Query: 525 EQEYTDGLLV--YRSEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPE-DKEI 361
+ EY V Y+++ + + EE + + E+E + DP W+ ++++ E D+EI
Sbjct: 1158 QNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLKHHYEQDREI 1215
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -2
Query: 525 EQEYTDGLLV--YRSEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPE-DKEI 361
+ EY V Y+++ + + EE + + E+E + DP W+ ++++ E D+EI
Sbjct: 1158 QNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLKHHYEQDREI 1215
>AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine
receptor, class z protein20 protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 361 YLLIFWS--VSDDRLPHRRIVFHFFLADRTGGVAFFTVCNVVSFT----TIHQ*TISVLL 522
Y+ +F + V D +P V HF+ R + F +C V+ F T+ ++ +L
Sbjct: 44 YVYVFKANRVLDKEIPIFPFVNHFYSVIRMVQIIFLCMCTVIIFIILAYTLRSTSLVILT 103
Query: 523 LCAAVWIILN 552
L ++++L+
Sbjct: 104 LAVMIFVVLS 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,944,040
Number of Sequences: 27780
Number of extensions: 223178
Number of successful extensions: 784
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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