Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B24
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   5.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.2  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 450 SSSAVSEEEVKYDPSVWQSVIRYG-PEDKEIHPAVRGTASAVVTVR 316
           ++  + EEE +Y PSV    + +   E     P +RG      T+R
Sbjct: 347 TADVLQEEEEEYSPSVQHEFVTFDLDEPLPPPPPIRGGEWTFDTLR 392


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 177 PAAGEGERDKFKCLYLLVE 121
           P  G GER + +CL+  V+
Sbjct: 129 PVTGCGERTEGRCLHYTVD 147


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 177 PAAGEGERDKFKCLYLLVE 121
           P  G GER + +CL+  V+
Sbjct: 134 PVTGCGERTEGRCLHYTVD 152


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 177 PAAGEGERDKFKCLYLLVE 121
           P  G GER + +CL+  V+
Sbjct: 134 PVTGCGERTEGRCLHYTVD 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,286
Number of Sequences: 438
Number of extensions: 3345
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)