Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B20
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...   150   1e-36
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...   150   1e-36
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...   150   1e-36
03_02_0966 + 12783515-12783901                                         30   2.2  
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85...    29   5.1  

>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score =  150 bits (364), Expect = 1e-36
 Identities = 84/204 (41%), Positives = 106/204 (51%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           G  AP    +P P      P  T F QV  IPT+  KG   II  V  +K GDKVG+ E+
Sbjct: 117 GLVAPVDVVVP-PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSES 175

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
            L   L I P SYGLV+  VYDSG++F+PE+LD+  +DL   F +GV+ VA++SLAI YP
Sbjct: 176 ALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYP 235

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXX 196
           TIA+APH   NG+KN+L               IKE++KDPSKF                 
Sbjct: 236 TIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSA 295

Query: 195 XXXXXXXXXXXXXSDDDMGFGLFD 124
                        SD D+G  LFD
Sbjct: 296 AKEEEKKEEPEEESDGDLGMSLFD 319


>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score =  150 bits (363), Expect = 1e-36
 Identities = 78/163 (47%), Positives = 98/163 (60%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           G  AP    +P P      P  T F QV  IPT+  KG   II  V  +K GDKVG+ E+
Sbjct: 117 GLVAPVDVVVP-PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSES 175

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
            L   L I P SYGLV+  VYDSG++F+PE+LD+  EDL   F +GV+ VA++SLAI YP
Sbjct: 176 ALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYP 235

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 247
           TIA+APH   NG+KN+L               IKE++KDPSKF
Sbjct: 236 TIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKF 278


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score =  150 bits (363), Expect = 1e-36
 Identities = 78/163 (47%), Positives = 98/163 (60%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           G  AP    +P P      P  T F QV  IPT+  KG   II  V  +K GDKVG+ E+
Sbjct: 117 GLVAPVDVVVP-PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSES 175

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
            L   L I P SYGLV+  VYDSG++F+PE+LD+  EDL   F +GV+ VA++SLAI YP
Sbjct: 176 ALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYP 235

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 247
           TIA+APH   NG+KN+L               IKE++KDPSKF
Sbjct: 236 TIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKF 278


>03_02_0966 + 12783515-12783901
          Length = 128

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 423 AGVANVAALSLAIGYPTIASAPHSIANGFKNLL 325
           AG+A VAA++ A+  P +A A  +++   KN L
Sbjct: 67  AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFL 99


>07_01_0115 +
           851505-852368,852611-852730,853000-853020,853253-853369,
           853466-853555,853730-853837,853897-853932,853933-854022
          Length = 481

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 450 PEDLRAXFQAGVANVAALSLAIGYPTIASAPHSIANGFK 334
           PE  RA F AG A V A      +P  A+A +S   GF+
Sbjct: 35  PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFR 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,552,882
Number of Sequences: 37544
Number of extensions: 210778
Number of successful extensions: 404
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)