Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B20
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...   201   9e-52
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...   201   9e-52
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...   201   9e-52
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...   201   9e-52

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score =  201 bits (490), Expect = 9e-52
 Identities = 113/205 (55%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           GA AP    IP        P  T F Q   IPT+  KG   II DV  LKPGDKVGA EA
Sbjct: 114 GAIAPLHVIIPAQNTGLG-PEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEA 172

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
           TL NMLNI P SYGL+V QVYDSG+IF+PEILDIKPEDLRA FQ GVAN+AA+ L++GYP
Sbjct: 173 TLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYP 232

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXX 199
           TIASAPHSIANGFKNLL               IKE+IKDPSKF                 
Sbjct: 233 TIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATE 292

Query: 198 XXXXXXXXXXXXXXSDDDMGFGLFD 124
                          DDDMGFGLFD
Sbjct: 293 KKEEAKKPESESEEEDDDMGFGLFD 317


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score =  201 bits (490), Expect = 9e-52
 Identities = 113/205 (55%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           GA AP    IP        P  T F Q   IPT+  KG   II DV  LKPGDKVGA EA
Sbjct: 114 GAIAPLHVIIPAQNTGLG-PEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEA 172

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
           TL NMLNI P SYGL+V QVYDSG+IF+PEILDIKPEDLRA FQ GVAN+AA+ L++GYP
Sbjct: 173 TLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYP 232

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXX 199
           TIASAPHSIANGFKNLL               IKE+IKDPSKF                 
Sbjct: 233 TIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATE 292

Query: 198 XXXXXXXXXXXXXXSDDDMGFGLFD 124
                          DDDMGFGLFD
Sbjct: 293 KKEEAKKPESESEEEDDDMGFGLFD 317


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score =  201 bits (490), Expect = 9e-52
 Identities = 113/205 (55%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           GA AP    IP        P  T F Q   IPT+  KG   II DV  LKPGDKVGA EA
Sbjct: 114 GAIAPLHVIIPAQNTGLG-PEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEA 172

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
           TL NMLNI P SYGL+V QVYDSG+IF+PEILDIKPEDLRA FQ GVAN+AA+ L++GYP
Sbjct: 173 TLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYP 232

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXX 199
           TIASAPHSIANGFKNLL               IKE+IKDPSKF                 
Sbjct: 233 TIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATE 292

Query: 198 XXXXXXXXXXXXXXSDDDMGFGLFD 124
                          DDDMGFGLFD
Sbjct: 293 KKEEAKKPESESEEEDDDMGFGLFD 317


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score =  201 bits (490), Expect = 9e-52
 Identities = 113/205 (55%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
 Frame = -2

Query: 735 GAXAPXSXXIPXPXXPAXVPXXTXFXQVXXIPTQDFKGXYXIIXDVHXLKPGDKVGAXEA 556
           GA AP    IP        P  T F Q   IPT+  KG   II DV  LKPGDKVGA EA
Sbjct: 114 GAIAPLHVIIPAQNTGLG-PEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEA 172

Query: 555 TLXNMLNIXPXSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGVANVAALSLAIGYP 376
           TL NMLNI P SYGL+V QVYDSG+IF+PEILDIKPEDLRA FQ GVAN+AA+ L++GYP
Sbjct: 173 TLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYP 232

Query: 375 TIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXX 199
           TIASAPHSIANGFKNLL               IKE+IKDPSKF                 
Sbjct: 233 TIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATE 292

Query: 198 XXXXXXXXXXXXXXSDDDMGFGLFD 124
                          DDDMGFGLFD
Sbjct: 293 KKEEAKKPESESEEEDDDMGFGLFD 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,891,476
Number of Sequences: 53049
Number of extensions: 340466
Number of successful extensions: 672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)