Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B17
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...    35   0.072
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...    35   0.072
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297...    29   4.7  
11_06_0183 - 20999343-20999865,21000351-21000748                       28   6.2  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score = 34.7 bits (76), Expect = 0.072
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 235 TKGVALEKFTFKFFDPXSKFGHGGFQ 158
           T  +ALE+   KF D  SKFGHG FQ
Sbjct: 350 TSRLALEEIKLKFIDTSSKFGHGRFQ 375


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score = 34.7 bits (76), Expect = 0.072
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 235 TKGVALEKFTFKFFDPXSKFGHGGFQ 158
           T  +ALE+   KF D  SKFGHG FQ
Sbjct: 350 TSRLALEEIKLKFIDTSSKFGHGRFQ 375


>08_01_0332 +
           2971361-2971439,2971596-2971783,2971985-2972062,
           2972354-2972425,2972513-2972631,2972858-2972942,
           2973096-2973185,2973268-2973369,2973448-2973624,
           2973874-2973954,2974511-2974582,2974662-2974756,
           2974831-2974919,2975016-2975078,2975161-2975204,
           2975554-2975685
          Length = 521

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 3   FFFFFALSNVYFHGL-HLRLRSSPAGGCGNR 92
           FFFFF  +N+ FH L +L LR     G G R
Sbjct: 308 FFFFFFCANILFHHLNYLLLRMKVIVGIGAR 338


>11_06_0183 - 20999343-20999865,21000351-21000748
          Length = 306

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 72  AGGCGNRSFFANTILLECTHECSXVNPXXWNPP*PNLDXGSK 197
           +G  GN     N+  +   H CS  +   W PP P  D  +K
Sbjct: 123 SGADGNLPSHRNSCAVTNMHACSTSSTTTWRPPPPPADDDAK 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,364,201
Number of Sequences: 37544
Number of extensions: 212495
Number of successful extensions: 336
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)