BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_B15
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0912 + 22544144-22545589 34 0.14
07_01_0934 + 7870920-7871454,7871533-7872413,7873313-7873414 33 0.18
06_01_1200 + 10323013-10324428 33 0.18
02_05_0797 - 31805956-31806902,31806992-31807505 33 0.24
02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225 32 0.56
04_04_0757 - 27822139-27823530 31 0.97
04_03_0347 + 14723118-14724548 31 0.97
02_05_0801 + 31824548-31825064,31825231-31826171 31 0.97
06_01_0793 - 5918912-5919793,5919830-5920285 31 1.3
04_03_0381 - 15163425-15164903 31 1.3
04_03_0380 - 15150814-15152304 31 1.3
04_03_0348 + 14735581-14737071 31 1.3
11_01_0274 - 2050667-2052115 30 1.7
04_03_0353 - 14785648-14787213 30 1.7
04_01_0546 + 7091058-7091508,7092221-7092542,7092783-7092822 30 1.7
11_06_0298 - 22072391-22073863 30 2.2
11_04_0147 - 14095039-14095937,14096914-14097379 30 2.2
08_02_0607 + 19285580-19286138,19286734-19287668 30 2.2
07_03_0514 + 18984375-18985865 30 2.2
04_03_0354 + 14830325-14830826,14831491-14832416 30 2.2
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 30 2.2
02_04_0351 + 22249117-22249624,22249710-22250674 30 2.2
09_04_0751 + 19927164-19927835,19927926-19928663 29 3.0
07_03_1569 - 27792739-27794175 29 3.0
07_01_0939 + 7939716-7940220,7940675-7941564 29 3.0
06_01_1204 + 10397131-10398498 29 3.0
03_06_0510 + 34423528-34424046,34424132-34425025 29 3.0
02_04_0349 + 22222091-22222639,22222718-22223695 29 3.0
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 29 3.9
09_04_0749 + 19919367-19920869 29 3.9
05_01_0530 - 4567481-4569043 29 3.9
04_04_0816 + 28288407-28289801 29 3.9
04_04_0758 - 27826787-27828178 29 3.9
04_03_0121 + 11506644-11508107 29 3.9
04_01_0552 + 7125735-7126424,7126473-7126911,7127694-7128031 29 3.9
11_06_0264 - 21785450-21786928 29 5.2
07_01_0349 + 2521006-2522439 29 5.2
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 29 5.2
04_04_0065 + 22456225-22456744,22456813-22457768 29 5.2
01_06_1056 + 34139467-34140013,34141437-34142338 29 5.2
06_01_1106 + 9111560-9112942 28 6.9
05_05_0323 - 24098962-24099866,24099941-24100442 28 6.9
04_04_0818 + 28309950-28311344 28 6.9
04_03_0369 + 15012906-15014417 28 6.9
04_03_0323 - 14364145-14365656 28 6.9
08_01_0459 - 4051250-4051405,4052044-4052353,4052454-4052767 28 9.1
04_04_0441 - 25226870-25228327 28 9.1
04_03_0115 - 11428116-11429594 28 9.1
03_06_0022 + 31085819-31086305,31086448-31087334 28 9.1
02_01_0657 - 4888723-4890156 28 9.1
>07_03_0912 + 22544144-22545589
Length = 481
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSGFAKSIQYKPDMAKD 402
S+ E+L +GVP+ P++G+Q NA AV S +++ + AKD
Sbjct: 363 SVLESLWFGVPMATWPLYGEQHLNAFEAVAS-MGVAVELRRTTAKD 407
>07_01_0934 + 7870920-7871454,7871533-7872413,7873313-7873414
Length = 505
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSN---ADRAVRSGFA 438
S E++ GVP+L P FGDQP N A+R R+G A
Sbjct: 379 STLESVCAGVPMLLRPCFGDQPGNARYAERVWRAGLA 415
>06_01_1200 + 10323013-10324428
Length = 471
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSG 444
S+ E GVP+LA+P FGDQ N+ R+G
Sbjct: 365 SVTEAAASGVPVLALPRFGDQRVNSGVVARAG 396
>02_05_0797 - 31805956-31806902,31806992-31807505
Length = 486
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 648 FKDXPEERYSFDXGCPQSSILXHPNVKFFITHGG 547
F +ER F CPQ +L HP F+TH G
Sbjct: 348 FVSETKERGIFLSWCPQEQVLEHPATGLFLTHSG 381
>02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225
Length = 489
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 648 FKDXPEERYSFDXGCPQSSILXHPNVKFFITHGG 547
F +ER CPQ +L HP+V F+TH G
Sbjct: 351 FVGETKERGVLASWCPQELVLSHPSVGLFLTHCG 384
>04_04_0757 - 27822139-27823530
Length = 463
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNAD 462
S E+L YG PILA P+ DQP +A+
Sbjct: 361 STMESLSYGKPILAWPMHSDQPWDAE 386
>04_03_0347 + 14723118-14724548
Length = 476
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 633 EERYSFDXGCPQSSILXHPNVKFFITHGG 547
E R CPQ ++ HP V F+TH G
Sbjct: 336 EGRSMLTTWCPQEQVIEHPAVGVFLTHSG 364
>02_05_0801 + 31824548-31825064,31825231-31826171
Length = 485
Score = 31.1 bits (67), Expect = 0.97
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ +L HP V F+TH G
Sbjct: 363 CPQQDVLNHPAVGAFLTHSG 382
>06_01_0793 - 5918912-5919793,5919830-5920285
Length = 445
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S+ E L +G P++ +P+FGDQ NA
Sbjct: 332 SLVEGLLFGNPLIMLPIFGDQGPNA 356
>04_03_0381 - 15163425-15164903
Length = 492
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ ++ HP V F+TH G
Sbjct: 361 CPQEQVIEHPAVGVFLTHSG 380
>04_03_0380 - 15150814-15152304
Length = 496
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ ++ HP V F+TH G
Sbjct: 367 CPQEQVIEHPAVGVFLTHSG 386
>04_03_0348 + 14735581-14737071
Length = 496
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ ++ HP V F+TH G
Sbjct: 367 CPQEQVIEHPAVGVFLTHSG 386
>11_01_0274 - 2050667-2052115
Length = 482
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSGFAKSIQYKPD--------MAKDMKVALN 384
S E L GVP++AVP + DQP+ A + + Y+ D +AK +K+ +
Sbjct: 379 STLEALELGVPMVAVPNWSDQPTIAYLVEKEWMVGTRVYRNDEGVIVGTELAKSVKIVMG 438
Query: 383 D 381
D
Sbjct: 439 D 439
>04_03_0353 - 14785648-14787213
Length = 521
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 648 FKDXPEERYSFDXGCPQSSILXHPNVKFFITHGG 547
F ER CPQ+ +L H V F+TH G
Sbjct: 388 FAAATRERSMLTTWCPQAEVLEHEAVGVFLTHSG 421
>04_01_0546 + 7091058-7091508,7092221-7092542,7092783-7092822
Length = 270
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSGFAKSIQYKPD 414
S E + GVP+LA+P + DQP+ A + + S + ++ + D
Sbjct: 161 STTEAIVTGVPLLAMPQWTDQPTTA-KYIESAWGNGVRVRRD 201
>11_06_0298 - 22072391-22073863
Length = 490
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S+ E+L +GVP++A P+F +Q NA
Sbjct: 390 SVLESLVHGVPMVAWPLFAEQRQNA 414
>11_04_0147 - 14095039-14095937,14096914-14097379
Length = 454
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 603 PQSSILXHPNVKFFITHGG 547
PQ +L HP+V+ F+TH G
Sbjct: 331 PQEKVLGHPSVRAFMTHNG 349
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S E++ GVP++ P FGDQ NA
Sbjct: 352 STIESISEGVPMICRPCFGDQMGNA 376
>08_02_0607 + 19285580-19286138,19286734-19287668
Length = 497
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 630 ERYSFDXGCPQSSILXHPNVKFFITHGG 547
ER CPQ+ +L H V F+TH G
Sbjct: 370 ERSMLTTWCPQAEVLEHEAVGVFLTHSG 397
>07_03_0514 + 18984375-18985865
Length = 496
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 603 PQSSILXHPNVKFFITHGG 547
PQ IL HP + F+THGG
Sbjct: 363 PQKEILAHPAIGGFVTHGG 381
>04_03_0354 + 14830325-14830826,14831491-14832416
Length = 475
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 630 ERYSFDXGCPQSSILXHPNVKFFITHGG 547
ER CPQ+ +L H V F+TH G
Sbjct: 348 ERSMLTTWCPQAEVLEHEAVGVFLTHSG 375
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S E L +G P++ +P+FGDQ NA
Sbjct: 672 STIEGLMFGHPLIMLPIFGDQGPNA 696
>02_04_0351 + 22249117-22249624,22249710-22250674
Length = 490
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 654 RXFKDXPEERYSFDXGCPQSSILXHPNVKFFITHGG 547
R F + + R C Q ++L HP V F+TH G
Sbjct: 350 REFTEATKGRGLVASWCDQEAVLRHPAVGLFLTHSG 385
>09_04_0751 + 19927164-19927835,19927926-19928663
Length = 469
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ +L HP V F+TH G
Sbjct: 342 CPQLEVLAHPAVGCFVTHCG 361
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSGFAKSIQYKPD 414
S E L GVP++AVP + DQ NA + + + ++ +PD
Sbjct: 364 STTEGLSAGVPMVAVPQWSDQTMNA-KYIEDVWRVGVRVRPD 404
>07_03_1569 - 27792739-27794175
Length = 478
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNAD 462
S+ E++ +G P+LA P+ DQP +A+
Sbjct: 376 SVVESMSHGKPVLAWPMHSDQPWDAE 401
>07_01_0939 + 7939716-7940220,7940675-7941564
Length = 464
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQ 477
S E+++ GVP+L+ P+FGDQ
Sbjct: 367 STLESIYEGVPMLSRPIFGDQ 387
>06_01_1204 + 10397131-10398498
Length = 455
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSG 444
S+ E GVP++A P F DQ NA R+G
Sbjct: 346 SVTEAAASGVPVVAWPRFADQRVNAGVVARAG 377
>03_06_0510 + 34423528-34424046,34424132-34425025
Length = 470
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S E+L GVP+L P FGDQ NA
Sbjct: 372 STTESLAEGVPMLCRPSFGDQMGNA 396
>02_04_0349 + 22222091-22222639,22222718-22223695
Length = 508
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ ++L H V F+TH G
Sbjct: 383 CPQEAVLRHEAVALFLTHSG 402
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S E+L GVP+L+ P F +QP+N+
Sbjct: 405 STLESLSGGVPMLSWPFFAEQPTNS 429
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSGFAKSIQYKPD 414
S E + GVP++AV + DQP+NA R V + ++ + D
Sbjct: 378 STVEAVSAGVPMVAVAQWSDQPTNA-RYVEEAWRVGVRARAD 418
>09_04_0749 + 19919367-19920869
Length = 500
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S E L GVP++AVP + DQ +NA
Sbjct: 390 STVEALSAGVPMVAVPQWSDQTTNA 414
>05_01_0530 - 4567481-4569043
Length = 520
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAV 453
S E+L +GVP+L P FGDQ N AV
Sbjct: 374 STVESLSHGVPLLTWPHFGDQFLNECLAV 402
>04_04_0816 + 28288407-28289801
Length = 464
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNAD 462
S E+L +G PILA P+ DQP +A+
Sbjct: 369 STMESLSHGKPILAWPMHSDQPWDAE 394
>04_04_0758 - 27826787-27828178
Length = 463
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNAD 462
S E+L +G PILA P+ DQP +A+
Sbjct: 361 STMESLSHGKPILAWPMHSDQPWDAE 386
>04_03_0121 + 11506644-11508107
Length = 487
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S+ E++ +GVPI+ P+ GDQ NA
Sbjct: 376 SVLESMTHGVPIIGWPLAGDQYYNA 400
>04_01_0552 + 7125735-7126424,7126473-7126911,7127694-7128031
Length = 488
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSGFAKSIQYKPD 414
S E + GVP+LA+P + DQP+ A + + S + ++ D
Sbjct: 387 STTEAIVTGVPLLAMPQWTDQPTTA-KYIESAWGNGVRVHRD 427
>11_06_0264 - 21785450-21786928
Length = 492
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 290 AISAW-LAAPPYRR-RPSTDISHVCSNYHCSAYHSEPPSCP*PYQACTVC 433
A SAW AA +RR R ST C Y C AY + + P A T C
Sbjct: 58 ACSAWRAAAAAFRRLRLSTPRQPPCLLYACDAYGPDAAALYSPSTAATFC 107
>07_01_0349 + 2521006-2522439
Length = 477
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 603 PQSSILXHPNVKFFITHGG 547
PQ+++L HP V F+TH G
Sbjct: 346 PQAAVLRHPAVGAFVTHSG 364
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 308 AAPPYRRRPSTDISHVCSNYHCSAYHSEPPS 400
A PPY+ P+ SHV + Y SAY PPS
Sbjct: 182 AVPPYQSYPA---SHVPAPYPTSAYPHPPPS 209
>04_04_0065 + 22456225-22456744,22456813-22457768
Length = 491
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ ++L H V F+TH G
Sbjct: 367 CPQEAVLRHEAVGVFLTHSG 386
>01_06_1056 + 34139467-34140013,34141437-34142338
Length = 482
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSN 468
S E + GVP+L +P+F DQP N
Sbjct: 376 STLEAVFAGVPMLTLPLFFDQPIN 399
>06_01_1106 + 9111560-9112942
Length = 460
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S+ E++ GVPILA P+ +Q NA
Sbjct: 347 SVLESISMGVPILAFPMAAEQKLNA 371
>05_05_0323 - 24098962-24099866,24099941-24100442
Length = 468
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQP 474
S E +H GVP+L +P+ DQP
Sbjct: 353 STLEAVHAGVPMLTLPIAFDQP 374
>04_04_0818 + 28309950-28311344
Length = 464
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNAD 462
S E++ +G PILA P+ DQP +A+
Sbjct: 369 STMESMSHGKPILAWPMHSDQPWDAE 394
>04_03_0369 + 15012906-15014417
Length = 503
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ +L H V F+TH G
Sbjct: 371 CPQEKVLEHDAVGVFLTHSG 390
>04_03_0323 - 14364145-14365656
Length = 503
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
CPQ +L H V F+TH G
Sbjct: 371 CPQEKVLEHDAVGVFLTHSG 390
>08_01_0459 - 4051250-4051405,4052044-4052353,4052454-4052767
Length = 259
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 606 CPQSSILXHPNVKFFITHGG 547
C Q +L HP V F+TH G
Sbjct: 134 CSQEQVLRHPAVGCFLTHSG 153
>04_04_0441 - 25226870-25228327
Length = 485
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNADRAVRSG 444
SI E+L +GVP+L PV +Q NA V G
Sbjct: 371 SILESLRHGVPLLGWPVGAEQFFNAMVVVEWG 402
>04_03_0115 - 11428116-11429594
Length = 492
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S+ E++ +GVPI+A P+ DQ NA
Sbjct: 383 SVLESMAHGVPIIAWPLTADQFFNA 407
>03_06_0022 + 31085819-31086305,31086448-31087334
Length = 457
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 603 PQSSILXHPNVKFFITHGG 547
PQ S+L HP++ F++H G
Sbjct: 338 PQQSVLSHPSIACFVSHCG 356
>02_01_0657 - 4888723-4890156
Length = 477
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 539 SIXETLHYGVPILAVPVFGDQPSNA 465
S ET+ GVP++A P +GDQ ++A
Sbjct: 376 STLETVAAGVPVVAFPQWGDQCTDA 400
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,264,949
Number of Sequences: 37544
Number of extensions: 364750
Number of successful extensions: 1201
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -