Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B14
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC073137-1|AAH73137.1|  428|Homo sapiens chromosome 14 open read...    30   7.3  
AK223312-1|BAD97032.1|  398|Homo sapiens Hypothetical protein FL...    30   7.3  
AK001994-1|BAA92026.1|  401|Homo sapiens protein ( Homo sapiens ...    30   7.3  
AF155112-1|AAD42878.1|  452|Homo sapiens NY-REN-50 antigen protein.    30   7.3  

>BC073137-1|AAH73137.1|  428|Homo sapiens chromosome 14 open reading
           frame 131 protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 638 PRXNIHFHQSPDAVXEGVRA-GVKPPLSSEXPSXXLTPXSXGHG*RGFRPLIFK*MMNHK 462
           P  N   H S     + +R+ G   PLSS   +  L P   GH   G    +    +NH+
Sbjct: 225 PGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHLNHQ 284

Query: 461 LRALLVVIPRILRSPP 414
             +   V+P  + +PP
Sbjct: 285 QPSPTSVLPTEVAAPP 300


>AK223312-1|BAD97032.1|  398|Homo sapiens Hypothetical protein
           FLJ11132 variant protein.
          Length = 398

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 638 PRXNIHFHQSPDAVXEGVRA-GVKPPLSSEXPSXXLTPXSXGHG*RGFRPLIFK*MMNHK 462
           P  N   H S     + +R+ G   PLSS   +  L P   GH   G    +    +NH+
Sbjct: 195 PGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHLNHQ 254

Query: 461 LRALLVVIPRILRSPP 414
             +   V+P  + +PP
Sbjct: 255 QPSPTSVLPTEVAAPP 270


>AK001994-1|BAA92026.1|  401|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11132 fis, clone PLACE1006335. ).
          Length = 401

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 638 PRXNIHFHQSPDAVXEGVRA-GVKPPLSSEXPSXXLTPXSXGHG*RGFRPLIFK*MMNHK 462
           P  N   H S     + +R+ G   PLSS   +  L P   GH   G    +    +NH+
Sbjct: 198 PGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHLNHQ 257

Query: 461 LRALLVVIPRILRSPP 414
             +   V+P  + +PP
Sbjct: 258 QPSPTSVLPTEVAAPP 273


>AF155112-1|AAD42878.1|  452|Homo sapiens NY-REN-50 antigen protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 638 PRXNIHFHQSPDAVXEGVRA-GVKPPLSSEXPSXXLTPXSXGHG*RGFRPLIFK*MMNHK 462
           P  N   H S     + +R+ G   PLSS   +  L P   GH   G    +    +NH+
Sbjct: 272 PGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHLNHQ 331

Query: 461 LRALLVVIPRILRSPP 414
             +   V+P  + +PP
Sbjct: 332 QPSPTSVLPTEVAAPP 347


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,747,350
Number of Sequences: 237096
Number of extensions: 1541497
Number of successful extensions: 3161
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)