Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_B10
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 230 8e-61
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 230 8e-61
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.0
07_01_0761 + 5849466-5850677 29 5.3
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.0
04_01_0376 - 4929447-4929731 28 9.3
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 230 bits (563), Expect = 8e-61
Identities = 115/201 (57%), Positives = 143/201 (71%)
Frame = -2
Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
IQ+ GG+ D+ + + + + + +DEMID IGVT+G+ V G R
Sbjct: 184 IQINGGTIADKVDYGYKFFEKEIPVDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRL- 241
Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
P + + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295
Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
Query: 219 EKINLKFIDTSSKFGHGRFQT 157
E+I LKFIDTSSKFGHGRFQT
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQT 376
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 230 bits (563), Expect = 8e-61
Identities = 115/201 (57%), Positives = 143/201 (71%)
Frame = -2
Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
IQ+ GG+ D+ + + + + + +DEMID IGVT+G+ V G R
Sbjct: 184 IQINGGTIADKVDYGYKFFEKEIPVDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRL- 241
Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
P + + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295
Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
Query: 219 EKINLKFIDTSSKFGHGRFQT 157
E+I LKFIDTSSKFGHGRFQT
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQT 376
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 378 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 283
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
>07_01_0761 + 5849466-5850677
Length = 403
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 612 VSLXVGTQRXYPVRHTKXLRKVACI--GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 439
V+L VG R V V+ + G HP SFT+ RA H K+ RI
Sbjct: 129 VALLVGNDRRLRVLDAAASAAVSLVPDGEHHPINCSFTLGRAASSSGEH------KVLRI 182
Query: 438 GQGIH 424
G +H
Sbjct: 183 GTVVH 187
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -2
Query: 522 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 373
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 372 SEKSITPMGGFPHYGEVNN 316
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
>04_01_0376 - 4929447-4929731
Length = 94
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 189 SSKFGHGRFQTPAXQGCIHGYTQEGSYSRRSCGYHNPSGCCAA 61
+++ G G + +G +HG+ G+ + RSC G C+A
Sbjct: 34 AARSGGGVHASAVRRGAVHGHAWCGARAERSCAAWLQQGRCSA 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,665,641
Number of Sequences: 37544
Number of extensions: 432701
Number of successful extensions: 866
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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