Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B10
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   298   5e-81
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   298   5e-81
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   298   5e-81
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   298   5e-81
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   298   5e-81

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  298 bits (732), Expect = 5e-81
 Identities = 146/203 (71%), Positives = 165/203 (81%)
 Frame = -2

Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
           IQL GGS  D+ + A+    + +  S +   QDEMIDC+GVT+G+    V+    T++  
Sbjct: 194 IQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKL- 251

Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
           P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIK
Sbjct: 252 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 311

Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
           NNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+AL
Sbjct: 312 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 371

Query: 219 EKINLKFIDTSSKFGHGRFQTPA 151
           E+I LKFIDTSSK GHGRFQTPA
Sbjct: 372 EQIKLKFIDTSSKMGHGRFQTPA 394



 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 146 KAAFMGTLKKDRIREE 99
           K AFMG LKKDR++EE
Sbjct: 396 KLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  298 bits (732), Expect = 5e-81
 Identities = 146/203 (71%), Positives = 165/203 (81%)
 Frame = -2

Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
           IQL GGS  D+ + A+    + +  S +   QDEMIDC+GVT+G+    V+    T++  
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKL- 240

Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
           P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIK
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
           NNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+AL
Sbjct: 301 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 360

Query: 219 EKINLKFIDTSSKFGHGRFQTPA 151
           E+I LKFIDTSSK GHGRFQTPA
Sbjct: 361 EQIKLKFIDTSSKMGHGRFQTPA 383



 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 146 KAAFMGTLKKDRIREE 99
           K AFMG LKKDR++EE
Sbjct: 385 KLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  298 bits (732), Expect = 5e-81
 Identities = 146/203 (71%), Positives = 165/203 (81%)
 Frame = -2

Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
           IQL GGS  D+ + A+    + +  S +   QDEMIDC+GVT+G+    V+    T++  
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKL- 227

Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
           P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIK
Sbjct: 228 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 287

Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
           NNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+AL
Sbjct: 288 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 347

Query: 219 EKINLKFIDTSSKFGHGRFQTPA 151
           E+I LKFIDTSSK GHGRFQTPA
Sbjct: 348 EQIKLKFIDTSSKMGHGRFQTPA 370



 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 146 KAAFMGTLKKDRIREE 99
           K AFMG LKKDR++EE
Sbjct: 372 KLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  298 bits (732), Expect = 5e-81
 Identities = 146/203 (71%), Positives = 165/203 (81%)
 Frame = -2

Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
           IQL GGS  D+ + A+    + +  S +   QDEMIDC+GVT+G+    V+    T++  
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKL- 227

Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
           P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIK
Sbjct: 228 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 287

Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
           NNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+AL
Sbjct: 288 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 347

Query: 219 EKINLKFIDTSSKFGHGRFQTPA 151
           E+I LKFIDTSSK GHGRFQTPA
Sbjct: 348 EQIKLKFIDTSSKMGHGRFQTPA 370



 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 146 KAAFMGTLKKDRIREE 99
           K AFMG LKKDR++EE
Sbjct: 372 KLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  298 bits (732), Expect = 5e-81
 Identities = 146/203 (71%), Positives = 165/203 (81%)
 Frame = -2

Query: 759 IQLXGGSXXDQSEMAQRTXWRNLSXSILCLPQDEMIDCIGVTQGQRIPKVSLXVGTQRXY 580
           IQL GGS  D+ + A+    + +  S +   QDEMIDC+GVT+G+    V+    T++  
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKL- 240

Query: 579 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 400
           P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIK
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 399 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 220
           NNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+AL
Sbjct: 301 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 360

Query: 219 EKINLKFIDTSSKFGHGRFQTPA 151
           E+I LKFIDTSSK GHGRFQTPA
Sbjct: 361 EQIKLKFIDTSSKMGHGRFQTPA 383



 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 146 KAAFMGTLKKDRIREE 99
           K AFMG LKKDR++EE
Sbjct: 385 KLAFMGPLKKDRLKEE 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,840,925
Number of Sequences: 53049
Number of extensions: 717011
Number of successful extensions: 1555
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)