Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_B07
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 32 0.43
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 30 1.7
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 29 4.0
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.0
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 4.0
08_02_1012 + 23550314-23551504 29 5.3
05_01_0570 + 5061600-5062142,5062790-5062972 29 5.3
03_05_0543 - 25404630-25405408,25405461-25405605 29 5.3
02_03_0093 - 15120951-15121344,15121658-15121953,15122119-151224... 29 5.3
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 28 7.0
04_04_1330 - 32700333-32700770 28 7.0
02_05_0781 + 31715100-31715672 28 7.0
12_02_1174 - 26696869-26698191 28 9.3
09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,598... 28 9.3
07_01_0080 + 587674-588510 28 9.3
05_06_0122 - 25775652-25775936,25776027-25776103,25776177-257762... 28 9.3
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +1
Query: 130 RAHPLNDSPXTLTPDVRSPSGVRTRSE*GGSRGQHYNQTRGATPRTPDRR 279
R P TLTP RSPS R S G N TRGA+P +RR
Sbjct: 141 RRSPTPPGNKTLTPPRRSPSPASRRMS-ATSSGPTLNGTRGASPVKTNRR 189
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 178 RSPSGVRTRSE*GGSRGQHYNQTRGATPR---TPDRRVVKAIVDDQRRRSPRY 327
+ PS +R+R GSRG+ Y+Q +PR P R R SPRY
Sbjct: 122 KKPSEMRSRDRISGSRGRSYDQRYSRSPRYSPPPRGRSPYRSPSYSRSPSPRY 174
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 197 EPVQSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STTNDVG 316
E + +RG T +HA PPRG P G + D G
Sbjct: 119 EKMMTRGRAETETARKHAPPPRGLPLLGEALTPQRKADAG 158
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +2
Query: 656 PXPXK--TPAPXXXGPGPHPXKKXPXXPPXXP 745
P P K P P GP P P K P PP P
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 656 PXPXKTPAPXXXGPGPHPXKKXPXXPPXXP 745
P P P P GP P P K P P P
Sbjct: 172 PKPGPKPKPPKPGPKPKPPKPGPKPKPKPP 201
>08_02_1012 + 23550314-23551504
Length = 396
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 656 PXPXKTPAPXXXGPGPHPXKKXPXXPPXXP 745
P P P+P P P P P PP P
Sbjct: 150 PRPPPAPSPQKQQPQPQPRSPRPASPPPVP 179
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 210 VGGFPRSTLQPDTRRHPEDARPTGRQGDSRRPTTS 314
VGG ++ RR P TG G +RRPT++
Sbjct: 159 VGGARGRAVRGSARRRPRKEETTGINGTARRPTST 193
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 662 PXKTPAPXXXGPGPHPXKKXPXXPP 736
P KTP+P P P P P PP
Sbjct: 110 PKKTPSPLTPSPTPSPVTPPPQQPP 134
>02_03_0093 -
15120951-15121344,15121658-15121953,15122119-15122419,
15123233-15123628,15123883-15124067
Length = 523
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 176 SDLRPGSEPVQSRGVPAVNTTTRHAAPPR--GRPTDGSSRR*STTN-DVG 316
S+ +PG PV++ G+ + +T R PPR G P S R S++ D+G
Sbjct: 416 SESQPGQAPVRTGGMRLMTSTGRDNQPPRSSGVPPSPSEWRSSSSRWDLG 465
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 656 PXPXKTPAPXXXGPGPHPXKKXPXXPP 736
P P TP P P P P + P PP
Sbjct: 58 PKPSPTPPPASPPPAPTPPQTRPPSPP 84
>04_04_1330 - 32700333-32700770
Length = 145
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 178 RSPSGVRTRSE*GGSRGQHYNQTRGATPRTPDRRVVKAIVDDQR 309
R G E GG R +H + A+P P+R VV + + +R
Sbjct: 22 RRRGGGSDGEELGGGRDEHEGERERASPVEPEREVVGVVGERER 65
>02_05_0781 + 31715100-31715672
Length = 190
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 203 VQSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STT 304
V + P RHAA P RP+ +SRR STT
Sbjct: 51 VSAAAQPQRAAKKRHAAAPPPRPSASTSRRSSTT 84
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 135 PPTKRLPXHSYTRRPISVRGQNPFRVGGFPRSTLQPDTRRHPED----ARPTGRQGDSRR 302
PP + P Y P ++ + G P S+ P T+ P P GD R
Sbjct: 302 PPPPQQPSQRYWTPPPAITPEPAKPAAGKPTSSSPPSTKDSPRPPLPAPSPAANGGDPRL 361
Query: 303 P-TTSVSAVRR 332
P TT +S +R
Sbjct: 362 PATTPLSKQKR 372
>09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,
5988427-5989228,5990966-5991016,5992391-5993464,
5994458-5994706
Length = 1666
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 71 PRAPPRRGDLVGGSAPGP 18
P PP+ G LVGGS P P
Sbjct: 1200 PATPPKGGPLVGGSLPCP 1217
>07_01_0080 + 587674-588510
Length = 278
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 641 GWDQTPXPXKTPAPXXXGPGPHPXKKXPXXPPXXP 745
G + P P P P P P P P PP P
Sbjct: 86 GMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>05_06_0122 -
25775652-25775936,25776027-25776103,25776177-25776281,
25776353-25776542,25776617-25776804,25776882-25777191
Length = 384
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/86 (25%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +3
Query: 240 PDTRRHPEDARP-TGRQGDSRRPTTSVSAVRRPYHAXRAXPXVXRDTPXGQNXPAGSEXD 416
P HP D +P T S P T + A ++ P G AG
Sbjct: 11 PSVEDHPSDNQPATDNVEPSNEPPTGNQSAE-------AEVGANQEPPTGNQSDAGPSQK 63
Query: 417 TPPTXXLFXXMXGDDSDDENADRIPV 494
P G D+D E+ R PV
Sbjct: 64 VPEVEAQTNSPLGKDADSESETRSPV 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,135,669
Number of Sequences: 37544
Number of extensions: 404490
Number of successful extensions: 1621
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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