Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B07
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.                   31   4.5  
BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.         31   4.5  
AB011156-1|BAA25510.1|  738|Homo sapiens KIAA0584 protein protein.     31   4.5  
BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein.        30   7.9  
AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription fa...    30   7.9  
AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein.     30   7.9  

>K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.
          Length = 198

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
 Frame = +3

Query: 132 GPPTKRLPXHSYTRRPISVRG--QNPFRVGGFPRSTLQPDTRRHPEDARPTGR-QGDSRR 302
           G P    P    +R P S  G  Q P   GG P+    P     P+   P G+ QG   +
Sbjct: 75  GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP-PPQGGNKPQGPPPPGKPQGPPAQ 133

Query: 303 PTTSVSAVRRPYHAXRAXPXVXRDTPXGQNXPAGSEXDTP 422
             +   + R P    +  P    + P G   PAG     P
Sbjct: 134 GGSKSQSARAPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 173


>BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.
          Length = 198

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
 Frame = +3

Query: 132 GPPTKRLPXHSYTRRPISVRG--QNPFRVGGFPRSTLQPDTRRHPEDARPTGR-QGDSRR 302
           G P    P    +R P S  G  Q P   GG P+    P     P+   P G+ QG   +
Sbjct: 75  GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP-PPQGGNKPQGPLPPGKPQGPPAQ 133

Query: 303 PTTSVSAVRRPYHAXRAXPXVXRDTPXGQNXPAGSEXDTP 422
             +   + R P    +  P    + P G   PAG     P
Sbjct: 134 GGSKSQSARAPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 173


>AB011156-1|BAA25510.1|  738|Homo sapiens KIAA0584 protein protein.
          Length = 738

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 222 PRSTLQPDTRRHPEDARPTGRQGDSRRPTTSVSAVRRP 335
           PRS L P +RR P  A+P  R   S  P ++ +   RP
Sbjct: 80  PRSPLLPGSRRRPHAAQPGARARTSPPPASARNMAARP 117


>BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein.
          Length = 1132

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 243 DTRRHPEDARPTGRQGDSRRPTTSVSAVRRPYH 341
           D  R  ED  P    G+ R+P +S S V++PY+
Sbjct: 408 DNMRSYEDQSPRQLPGEDRKPKSSDSHVKKPYY 440


>AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription
           factor 1-like protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 243 DTRRHPEDARPTGRQGDSRRPTTSVSAVRRPYH 341
           D  R  ED  P    G+ R+P +S S V++PY+
Sbjct: 460 DNMRSYEDQSPRQLPGEDRKPKSSDSHVKKPYY 492


>AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein.
          Length = 1154

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 243 DTRRHPEDARPTGRQGDSRRPTTSVSAVRRPYH 341
           D  R  ED  P    G+ R+P +S S V++PY+
Sbjct: 430 DNMRSYEDQSPRQLPGEDRKPKSSDSHVKKPYY 462


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,540,988
Number of Sequences: 237096
Number of extensions: 2072324
Number of successful extensions: 7653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7499
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)