Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B07
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.58 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.58 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.4  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   7.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 70  GYVRLNDLQVLRADRGPKDFRAH--PLNDSPXTLTPDVRSPSGVRTRSE*GGSRGQHYNQ 243
           GY ++  LQVL A   P+DF  +   L+D   TL P +R+PS   T     G+   HY  
Sbjct: 82  GYDKI--LQVLGAT--PRDFLQNLDALHDHLGTLYPGMRAPSFRCTERPEDGALILHYYS 137

Query: 244 TR 249
            R
Sbjct: 138 DR 139


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 70  GYVRLNDLQVLRADRGPKDFRAH--PLNDSPXTLTPDVRSPSGVRTRSE*GGSRGQHYNQ 243
           GY ++  LQVL A   P+DF  +   L+D   TL P +R+PS   T     G+   HY  
Sbjct: 82  GYDKI--LQVLGAT--PRDFLQNLDALHDHLGTLYPGMRAPSFRCTERPEDGALILHYYS 137

Query: 244 TR 249
            R
Sbjct: 138 DR 139


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +2

Query: 656 PXPXKTPAPXXXGPGPHPXK-KXPXXPPXXP 745
           P P ++P     G  P+P +   P  PP  P
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 603 HHPAXCPPHRG 635
           HHP+   PHRG
Sbjct: 321 HHPSQYHPHRG 331


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +2

Query: 656 PXPXKTPAPXXXGPGP-HPXKKXP 724
           P P + P P   G GP +P  K P
Sbjct: 27  PQPGRRPFPTFPGQGPFNPKIKWP 50


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 558  WRXQXPTPXXPP 593
            WR Q P P  PP
Sbjct: 1350 WRQQQPPPPPPP 1361


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 238 NQTRGATPRTPDRRVVKAIVDDQRRRSPR 324
           ++ R   P   D  ++KAI+D  R  + R
Sbjct: 59  DEKRSGRPVEVDDDLIKAIIDSDRHSTTR 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,410
Number of Sequences: 438
Number of extensions: 2949
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)