Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_B06
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,557... 44 2e-08
07_03_1474 - 26766078-26766536,26766634-26766885,26767201-267674... 31 1.3
05_03_0328 - 12468142-12468262,12468443-12468641,12468758-124689... 31 1.3
12_02_1165 + 26633371-26633679,26635183-26635276,26635732-266358... 30 1.7
09_06_0013 - 20227302-20227325,20227811-20227834,20228111-202282... 29 3.9
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 29 3.9
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 29 5.1
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 28 9.0
>07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,
5572773-5572949,5573049-5573145,5573575-5573687,
5573774-5573896,5574004-5574075,5575340-5575432,
5575564-5575674,5575767-5575889,5576834-5576890,
5576939-5577022,5577140-5577214,5577418-5577554,
5577719-5577853,5579029-5579168,5579334-5579399,
5579732-5579838,5579910-5579990,5580064-5580138,
5580224-5580325,5581837-5582005,5582090-5582217,
5582596-5582679,5582779-5582879,5583729-5583882,
5583964-5584038,5584112-5584262,5584463-5585078,
5585427-5585487,5585874-5586019,5586104-5586287,
5586363-5586440,5586603-5586931,5587023-5587199,
5587571-5587667,5587742-5587897,5587962-5588198,
5588271-5588354,5588426-5588486,5588762-5588898
Length = 1912
Score = 44.0 bits (99), Expect(2) = 2e-08
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = -2
Query: 318 YPQRVDVCAVYVDMLVKENDIERVRQVMERITSHQLPARKMK 193
YP+R D+ +VY+D ++ D E +R + ER+T LP +KMK
Sbjct: 1806 YPKRTDLWSVYLDQEIRLGDTEIIRALFERVTCLSLPPKKMK 1847
Score = 32.7 bits (71), Expect(2) = 2e-08
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = -2
Query: 186 YKKWIEVEEKIGDEGKAEIIRQRAIEXVEKA 94
+KK++E E+ GDE + E ++Q+A+E V+ +
Sbjct: 1880 FKKYLEYEKSQGDEERIEHVKQKALEYVQSS 1910
>07_03_1474 -
26766078-26766536,26766634-26766885,26767201-26767401,
26767986-26768156,26768249-26768433,26768526-26768851,
26769430-26770631
Length = 931
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Frame = -2
Query: 519 IXKTYTLCGTACYKLNLKEKARYVMQKALNVLEKKEHVQVLVQFXXXXXXXXXXXXXXXX 340
I TY Y+ + E+AR + +A+ +E + +Q+
Sbjct: 598 IWVTYLTKFVRRYQRSKLERARELFDEAVKQAPPQEKKVLYLQYAKLEEDYGLAKRAMNV 657
Query: 339 XXXXXAVYP--QRVDVCAVYVDMLVKENDIERVRQVMERITSHQLPARKMKKXYKKWIEV 166
P +++ + +Y+ + + R RQ+ E+ LP R + K+ E+
Sbjct: 658 YDEAVRAVPNSEKMSMYEIYIARAAELFGVPRTRQIYEQAIESGLPDRDVMTMCMKFAEL 717
Query: 165 EEKIGDEGKAEII 127
E +G+ +A I
Sbjct: 718 ERNLGEIDRARAI 730
>05_03_0328 -
12468142-12468262,12468443-12468641,12468758-12468974,
12469896-12469994,12470843-12470899,12470943-12472577
Length = 775
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = -2
Query: 309 RVDVCAVYVDMLVKENDIERVRQVMERITSHQLPARKMKKXYKKWIEVEEKIGDEGKAEI 130
R D Y +K ++ER RQV +R + + + E EE+ + +A
Sbjct: 240 RPDTFIRYAKFEMKRGEVERARQVYQRAADLLADDEDAQVLFVAFAEFEERCREVERARA 299
Query: 129 IRQRAIEXVEKAK 91
I + A++ V K +
Sbjct: 300 IYKYALDRVPKGQ 312
>12_02_1165 +
26633371-26633679,26635183-26635276,26635732-26635822,
26636112-26636199,26636300-26636341,26636648-26636809,
26636915-26637094,26637280-26637447,26637977-26638195
Length = 450
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 268 LNEHIDVHGTHVDALRVNSEHLFE*GFXXXXXXXXXXXQGELHQHLYMFFL-LQNVQG-L 441
L+E + +G + +N E + G+ G+LHQ FF L+ +G
Sbjct: 307 LHEQLKAYGFSISPQLINREFITSFGYLNYLERTSNCISGDLHQKFDRFFCGLEMSEGEF 366
Query: 442 LHNVSRFLFEIQFVAGCPAQR 504
+ V+ L ++ VA P +R
Sbjct: 367 VRGVAHRLHSMEEVASTPGRR 387
>09_06_0013 -
20227302-20227325,20227811-20227834,20228111-20228219,
20228346-20228470,20229427-20229576,20229621-20229685,
20229808-20229952
Length = 213
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 350 LKPYSNKCSLFTR--NASTCVPCTSICSLRKTI 258
L P+ NKCS F+R N CV C S R+ +
Sbjct: 144 LVPFKNKCSFFSRKKNDEECVICKSTYKSRQKL 176
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -2
Query: 291 VYVDMLVKENDIERVRQVMERITSHQLPARKMKKXYKKWIEVEEKIGDEGKAEIIRQRAI 112
+Y +K ++ER R+V ER + + + E EE+ + +A + + A+
Sbjct: 231 LYAKFEMKRGEVERARRVYERAADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYAL 290
Query: 111 EXVEKAK 91
+ V K +
Sbjct: 291 DRVPKGQ 297
>09_04_0203 - 15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -1
Query: 592 IYVDTGKQQELSALVDLMLRKYXRDPXNLHAVRDSLLQTESQRESEIRYAEGLERFGEER 413
+++ TG + L+ LM+ Y N H +RDS+ + ++Q+E E E + +ER
Sbjct: 843 LFLVTGVASTSALLIALMMTLYK----NKHRIRDSIRRGQTQKEYE---RETINEQNQER 895
Query: 412 TCTS 401
T S
Sbjct: 896 TIDS 899
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +1
Query: 268 LNEHIDVHGTHVDALRVNSEHLFE*GFXXXXXXXXXXXQGELHQHLYMFFL-LQNVQGL- 441
L+E + +G + +N E + G+ G+LHQ FF L+ +G+
Sbjct: 450 LHEQLKAYGFSISPQLINREFITSFGYLNYLERTSKNISGDLHQKFDRFFCGLEMSEGVF 509
Query: 442 LHNVSRFLFEIQFVAGCPAQR 504
+ V+ L ++ VA P +R
Sbjct: 510 VKVVADRLCSMEEVASTPGRR 530
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,874
Number of Sequences: 37544
Number of extensions: 243029
Number of successful extensions: 727
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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