Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_B04
         (1208 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    40   0.003
U64609-1|AAB04598.1|  405|Caenorhabditis elegans Sperm-specific ...    33   0.31 
AL008867-2|CAE17750.1|  763|Caenorhabditis elegans Hypothetical ...    32   0.94 
Z70284-9|CAA94280.1|  290|Caenorhabditis elegans Hypothetical pr...    31   1.6  
AF098992-4|AAK73869.2|  250|Caenorhabditis elegans Hypothetical ...    31   2.2  
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr...    30   2.9  
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr...    30   2.9  
Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical pr...    30   2.9  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    30   2.9  
U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical p...    30   3.8  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    30   3.8  
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    29   5.0  
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    29   6.6  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   6.6  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   6.6  
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    29   6.6  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   8.7  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   8.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    29   8.7  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    29   8.7  

>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 24/91 (26%), Positives = 27/91 (29%)
 Frame = +3

Query: 306 PXQPRXXHXPXXPXXTPXKKHQXPXXPHWSXXKPNXTXNPSXXPPPGXXDXPHPQHXTNK 485
           P  P     P  P   P  K      P +S   P  T  P+  PPP     P P     +
Sbjct: 433 PKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAP-PPPSRIPNPSPSPQPAE 491

Query: 486 AQXXPXXXXXXXXXXXXXXXPXXPPPXXPPP 578
               P               P  PPP  PPP
Sbjct: 492 VSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522


>U64609-1|AAB04598.1|  405|Caenorhabditis elegans Sperm-specific
           family, class qprotein 2 protein.
          Length = 405

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
 Frame = -3

Query: 246 GGXWVRCVXGGXVXVXGVXXXXGVVXGGGGXG-----XGXGXXXXGGRPCXXGLGXPXPA 82
           GG     V GG     G     G   GGGG G        G    GG P    +G P PA
Sbjct: 30  GGGGASKVGGGAAPPPGTSVYMGAGGGGGGGGAQSAYFAVGGAPVGGAPAAVSIGAPPPA 89

Query: 81  XWGSS 67
             G +
Sbjct: 90  GGGGA 94


>AL008867-2|CAE17750.1|  763|Caenorhabditis elegans Hypothetical
            protein C46E1.3 protein.
          Length = 763

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 1141 TPPXXNPNPPHXXPPPXNPPK 1203
            +PP  +P PP   PPP +PPK
Sbjct: 80   SPPRSSPPPPPSIPPPSDPPK 100


>Z70284-9|CAA94280.1|  290|Caenorhabditis elegans Hypothetical
           protein K07F5.11 protein.
          Length = 290

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
 Frame = -3

Query: 246 GGXWVRCVXGGXVXVXGVXXXXGVVXGGGGXGXGX------GXXXXGGRPCXXGLGXPXP 85
           GG     V G      G     G   GGGG G         G    GG P    +G P P
Sbjct: 30  GGGGASKVGGAGAPPPGTSVYMGAGAGGGGGGGAQSAYFAVGGAPVGGAPAAVPMGAPPP 89

Query: 84  AXWGSS 67
           A  G+S
Sbjct: 90  AGGGAS 95


>AF098992-4|AAK73869.2|  250|Caenorhabditis elegans Hypothetical
            protein F53C3.6a protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -1

Query: 1208 GGXGGFXGGGXXWGGFGFXXGGVXXS 1131
            GG GG  GGG   GG GF  GG   S
Sbjct: 41   GGVGGRGGGGRGGGGGGFRSGGARSS 66


>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
           protein B0379.3b protein.
          Length = 1050

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 762 PXPXKHPPHPXHHXXPXHHQXXHPPXPPQN 851
           P P ++ P P HH  P H        PP N
Sbjct: 745 PQPHQYAPQPIHHQQPIHQPMHGQQYPPVN 774


>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
           protein B0379.3a protein.
          Length = 1054

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 762 PXPXKHPPHPXHHXXPXHHQXXHPPXPPQN 851
           P P ++ P P HH  P H        PP N
Sbjct: 749 PQPHQYAPQPIHHQQPIHQPMHGQQYPPVN 778


>Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical
           protein T21B4.2 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -3

Query: 168 GGGGXGXGXGXXXXGGRPCXXGLGXPXPA 82
           GGGG   G G    GG  C  G+G   PA
Sbjct: 102 GGGGYATGGGGGGGGGGCCSCGIGAAGPA 130


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
            protein T20B6.3 protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 1208 GGXGGFXGGGXXWGGFGFXXGGV 1140
            GG GG+ GGG   GG G   GG+
Sbjct: 178  GGDGGYGGGGFGGGGMGGYGGGM 200



 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 1205 GXGGFXGGGXXWGGFGFXXGG 1143
            G GG+ GGG   GG+G   GG
Sbjct: 115  GGGGYGGGGDGGGGYGGYGGG 135


>U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical
           protein F25B5.7c protein.
          Length = 282

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = -3

Query: 219 GGXVXVXGVXXXXGVVXGGGGXGXGXGXXXXGGRPCXXGLGXPXPAXWG 73
           GG     G     G   G GG G   G    GG P   G+G P P   G
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 207


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = -3

Query: 219 GGXVXVXGVXXXXGVVXGGGGXGXGXGXXXXGGRPCXXGLGXPXPAXWG 73
           GG     G     G   G GG G   G    GG P   G+G P P   G
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 487


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 27/95 (28%), Positives = 32/95 (33%)
 Frame = +3

Query: 198 PKXXXXPPXRTEPNXHXTKHKKNXXPXXRAXXEKPXPXQPRXXHXPXXPXXTPXKKHQXP 377
           PK    P  + EP     K K    P       KP P +P+    P  P   P  K +  
Sbjct: 207 PKPEPKPKPKPEPKPKP-KPKPKPKPKPNPNP-KPEP-KPKPKPKPK-PEPKPKTKLKSE 262

Query: 378 XXPHWSXXKPNXTXNPSXXPPPGXXDXPHPQHXTN 482
             P     KP    NP   P P     P P+H  N
Sbjct: 263 PKPK-PKLKPKPKPNPKPEPNPMPELKPKPKHKPN 296


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical protein
            T19A5.3a protein.
          Length = 715

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -1

Query: 1208 GGXGGFXGGGXXWGGFGFXXGG 1143
            GG GGF GGG   GGFG   GG
Sbjct: 484  GGGGGFGGGG---GGFGGGGGG 502


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 30/126 (23%), Positives = 38/126 (30%), Gaps = 5/126 (3%)
 Frame = +3

Query: 216 PPXRTEPNXHXTKHKKNXXPXXRAXXEKPXPXQPRXXHXPXXPXXTPXKKHQXPXX-PHW 392
           PP    P       +++  P   A    P P   +    P  P   P  +H  P   P  
Sbjct: 26  PPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPP-APYPQHAVPAPAPPL 84

Query: 393 SXXKPNXTXNPSXXPPPGXXDXPHPQHXTNKAQXXPXXXXXXXXXXXXXXX----PXXPP 560
           +    N    P+  PPP     P+PQH        P                   P  PP
Sbjct: 85  ASYPQNAVPVPA--PPPA----PYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPP 138

Query: 561 PXXPPP 578
           P  PPP
Sbjct: 139 PHYPPP 144


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
            related) protein 4 protein.
          Length = 210

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 1144 PPXXNPNPPHXXPPPXNPPKP 1206
            PP   P PP   PPP  PP P
Sbjct: 52   PPQFCPPPPMCPPPPPPPPPP 72



 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 1144 PPXXNPNPPHXXPPPXNPPKP 1206
            PP   P PP   PPP  PP P
Sbjct: 58   PPPMCPPPPPPPPPPMCPPPP 78


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
            protein Y71H2AM.19 protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 1208 GGXGGFXGGG-XXWGGFGFXXGG 1143
            GG GGF GGG    GG GF  GG
Sbjct: 601  GGGGGFGGGGQRSGGGGGFQSGG 623


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical protein
            F58E10.3a protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 1208 GGXGGFXGGGXXWGGFGFXXGG 1143
            GG GG+ GGG   GG G   GG
Sbjct: 47   GGGGGYGGGGYGGGGRGGGRGG 68


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -3

Query: 219 GGXVXVXGVXXXXGVVXGGGGXGXGXGXXXXGGRPCXXGLGXPXP 85
           GG     G     G   GGGG   G G    GG  C  G   P P
Sbjct: 70  GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPP 114


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +1

Query: 1141 TPPXXNP-NPPHXXPPPXNPPKP 1206
            TPP   P NPP   P P  PP P
Sbjct: 174  TPPSPEPRNPPRTPPSPIPPPPP 196


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
            protein 1, isoform d protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 1208 GGXGGFXGGGXXWGGFGFXXGG 1143
            GG GGF GG   +GG G   GG
Sbjct: 61   GGGGGFGGGNGGFGGGGGGSGG 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.304    0.132    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,244,117
Number of Sequences: 27780
Number of extensions: 173360
Number of successful extensions: 1244
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)