Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_B01
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.016
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.085
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.20
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 28 1.4
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 3.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 5.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.4
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.016
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPA 711
PP P T AP P P PP P PPP G P P PA
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 580 KTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
K+ P P P P P PPP P P A PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.085
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
PP P+ P T AP P + PP +P P P P P + P K P
Sbjct: 130 PPTPQSELRPPTSAP-PRPS-IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 26.2 bits (55), Expect = 5.6
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 550 PPXP-KXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKP 717
PP P P P P P P PP P PP P P K P P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLP-PPAQPAAPVKSPPSAPSLPSAVP-PMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/54 (27%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 PXPKXPXXPKTXAPNPXXTPXP-PXTPXKXPXPPPXTXXTXGXAPXPXKXKRPA 711
P P P P P+ P P P K P PP + P PA
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPA 225
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Frame = +1
Query: 559 PKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKR-----PAKPP 720
P P P++ A P PP P PPP + + G P P R PA PP
Sbjct: 337 PPPPPPPRSNAAGSI--PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.9 bits (64), Expect = 0.45
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPP 654
P P P P A P P PP P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.1 bits (62), Expect = 0.79
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 553 PXPKXPXXPKTXAPN-PXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
P P P + P+ P P P P P PP P P PA PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP--PAAPAPPP 478
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 559 PKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKP 717
P P P P P P P P PP AP P PA P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP--LPPAAPAPPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPP 654
P P P P P P P P P PPP
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPX--PPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
P P +T P P TP PP P P P + A P P PP
Sbjct: 401 PALPPLGNASRTSTP-PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/61 (26%), Positives = 19/61 (31%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPPXXR 729
PP P P P P P PPP G P P + + PP R
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP---PPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 730 A 732
+
Sbjct: 368 S 368
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPP--PXTXXTXGXAPXPXKXKRPA 711
PP P P P PP P P P P AP P PA
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +1
Query: 553 PXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXP 690
P P P++ AP P PP P P PP G P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +1
Query: 568 PXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
P P + P + PP P PPP + AP P P+ PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPP 1732
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 458 PXPGXPPTQXPPPXHIXKHPXXPXTXHPKTXP 553
P P PP PPP P P + P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 559 PKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPP 654
P P P + P P P P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 616 PPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
PP P PP T P K PA+PP
Sbjct: 177 PPNAPYYHEIEPPRTASNTSPTPNSIKSAHPAEPP 211
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 550 PPXPKXPXXP-KTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAP 684
PP P T A P T PP P + PP T G +P
Sbjct: 10 PPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPTAVQGGSSP 55
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +1
Query: 559 PKXPXXPKTXAPNPXXTPXPPXTPXKXPXPP--PXTXXTXGXAPXPXK-XKRPAKPP 720
P+ P T AP P PP P + P P T + P +P PP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPPXXR 729
PP PK P P P + P PPP T P P P P +
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP---PVPTPSAGLPPVPVPTAK 1235
Query: 730 A 732
A
Sbjct: 1236 A 1236
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPP 654
PP P P P+ P P T P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 467 GXPPTQXPPPXHIXKHP 517
G PP+Q PPP HP
Sbjct: 105 GGPPSQLPPPPQPQSHP 121
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +1
Query: 568 PXXPKTXA-PNPXXTPXPPXTPXKX-PXPPPXTXXTXGXAPXPXKXKRPAK 714
P P+T + +P T TP P PPP T T G P + P +
Sbjct: 824 PTVPRTTSYTSPYATTSSHITPADVHPLPPPSTSTTAGWNDAPMLGQLPMR 874
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/57 (24%), Positives = 16/57 (28%)
Frame = +1
Query: 550 PPXPKXPXXPKTXAPNPXXTPXPPXTPXKXPXPPPXTXXTXGXAPXPXKXKRPAKPP 720
P P+ P P P P PP P P P + P PP
Sbjct: 647 PSVPQRPAVP--VVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPP 701
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.306 0.127 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,385,516
Number of Sequences: 5004
Number of extensions: 15261
Number of successful extensions: 77
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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