Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_A23
(761 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 63 9e-10
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 63 9e-10
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 63 9e-10
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 63 9e-10
AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cat... 33 0.84
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 31 5.9
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 31 5.9
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 7.8
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 30 7.8
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 7.8
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 30 7.8
AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive dom... 30 7.8
AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 30 7.8
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 30 7.8
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 30 7.8
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 7.8
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 30 7.8
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 63.3 bits (147), Expect = 9e-10
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = -1
Query: 524 EQLPPLDQLETKIDIDALESSRWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXX 348
+ LP D + K+D++ALE+S GA + KK + + P G G
Sbjct: 449 KHLPSSDSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKK 503
Query: 347 XXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYD 186
KLP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D
Sbjct: 504 KGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELD 559
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 63.3 bits (147), Expect = 9e-10
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = -1
Query: 524 EQLPPLDQLETKIDIDALESSRWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXX 348
+ LP D + K+D++ALE+S GA + KK + + P G G
Sbjct: 504 KHLPSSDSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKK 558
Query: 347 XXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYD 186
KLP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D
Sbjct: 559 KGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELD 614
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 63.3 bits (147), Expect = 9e-10
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = -1
Query: 524 EQLPPLDQLETKIDIDALESSRWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXX 348
+ LP D + K+D++ALE+S GA + KK + + P G G
Sbjct: 504 KHLPSSDSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKK 558
Query: 347 XXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYD 186
KLP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D
Sbjct: 559 KGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELD 614
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 63.3 bits (147), Expect = 9e-10
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = -1
Query: 524 EQLPPLDQLETKIDIDALESSRWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXX 348
+ LP D + K+D++ALE+S GA + KK + + P G G
Sbjct: 504 KHLPSSDSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKK 558
Query: 347 XXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYD 186
KLP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D
Sbjct: 559 KGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSEVD 614
>AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cation
channel 3 isoform c variant protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.84
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 520 SCRPWTSSRRKSILTPWNRR 461
+C PWTSS R S + PW+RR
Sbjct: 397 TCWPWTSSLRPSTMRPWSRR 416
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 30.7 bits (66), Expect = 5.9
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = -2
Query: 400 PELPALSWDRRRKRNASATANSRRTQTS------PNLPIRKGGCQSTSELRTESDEALD- 242
P+ LS DRR R A +A+S+ +S P+ ++GGC E + AL
Sbjct: 151 PQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQP 210
Query: 241 VTSSRVAKECPP 206
V R+A PP
Sbjct: 211 VQLPRLALSPPP 222
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 317 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 216
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRG 2147
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive domain
1A (SWI- like) isoform a variant protein.
Length = 1181
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 741 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 779
>AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens
cDNA FLJ90459 fis, clone NT2RP3001754. ).
Length = 754
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 314 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 352
>AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ30579 fis, clone BRAWH2006989, weakly similar to
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
2.7.7.6). ).
Length = 260
Score = 30.3 bits (65), Expect = 7.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 140 SWQRSPG*AWSAVYSCHIDPWQWW 211
SW SP +++S H PW WW
Sbjct: 174 SWSHSPHSRSHSLWSSHSSPWFWW 197
>AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ14749 fis, clone NT2RP3002876, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 613
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 173 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 211
>AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens
cDNA FLJ14536 fis, clone NT2RM2001105, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 527
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 87 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 125
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1559 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1597
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein p270
protein.
Length = 1927
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1487 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1525
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling factor
p250 protein.
Length = 1939
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 301 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 185
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1499 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,472,465
Number of Sequences: 237096
Number of extensions: 1432194
Number of successful extensions: 3799
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3794
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -