Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_A21
         (838 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       35   0.001
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.65 

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 34.7 bits (76), Expect = 0.001
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 417 PPPXPXHRPXAPHXXXXPXPXPGXPPPXRPGXPXPGXP 530
           P P P   P AP     P P  G PP   PG P    P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 16/61 (26%), Positives = 17/61 (27%)
 Frame = +3

Query: 348 VPPPXXXPGGXRSPXXXSPXXXXPPPXPXHRPXAPHXXXXPXPXPGXPPPXRPGXPXPGX 527
           +P P       R      P    P   P  RP  P     P   PG   P     P P  
Sbjct: 106 IPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 165

Query: 528 P 530
           P
Sbjct: 166 P 166



 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/46 (30%), Positives = 14/46 (30%)
 Frame = +3

Query: 402 PXXXXPPPXPXHRPXAPHXXXXPXPXPGXPPPXRPGXPXPGXPPRR 539
           P    P   P  RP  P     P   PG   P     P P  P  R
Sbjct: 98  PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLR 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,527
Number of Sequences: 438
Number of extensions: 5867
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)