Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_A05
         (947 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF065164-1|AAC28444.2|  889|Homo sapiens hyperpolarization-activ...    32   3.5  
AL356913-2|CAI22674.1|  828|Homo sapiens SH3-domain GRB2-like (e...    31   8.1  
AL354978-6|CAH71846.1|  828|Homo sapiens SH3-domain GRB2-like (e...    31   8.1  
AL139147-3|CAI21943.1|  828|Homo sapiens SH3-domain GRB2-like (e...    31   8.1  
AB210039-1|BAE06121.1|  856|Homo sapiens DKFZp761D221 variant pr...    31   8.1  

>AF065164-1|AAC28444.2|  889|Homo sapiens
           hyperpolarization-activated, cyclic nucleotide-gated
           channel 2 protein.
          Length = 889

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
 Frame = +1

Query: 325 RPAQGGGRXPXTTPXXTHDXRPPXQXTPXAP---NXPXNXPKQPPRXPHTXAXP 477
           RP +  G  P T P      RPP Q  P  P     P   P  P   P   A P
Sbjct: 9   RPGESPGASPTTGPPPPPPPRPPKQQPPPPPPPAPPPGPGPAPPQHPPRAEALP 62


>AL356913-2|CAI22674.1|  828|Homo sapiens SH3-domain GRB2-like
           (endophilin) interacting protein 1 protein.
          Length = 828

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 328 PAQGGGRXPXTTPXXTHDXRPPXQXTPXAPNXPXNXPKQPPRXP 459
           P  G G  P TT   +   RP     P     P   P +PP  P
Sbjct: 426 PGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPPSRP 469


>AL354978-6|CAH71846.1|  828|Homo sapiens SH3-domain GRB2-like
           (endophilin) interacting protein 1 protein.
          Length = 828

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 328 PAQGGGRXPXTTPXXTHDXRPPXQXTPXAPNXPXNXPKQPPRXP 459
           P  G G  P TT   +   RP     P     P   P +PP  P
Sbjct: 426 PGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPPSRP 469


>AL139147-3|CAI21943.1|  828|Homo sapiens SH3-domain GRB2-like
           (endophilin) interacting protein 1 protein.
          Length = 828

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 328 PAQGGGRXPXTTPXXTHDXRPPXQXTPXAPNXPXNXPKQPPRXP 459
           P  G G  P TT   +   RP     P     P   P +PP  P
Sbjct: 426 PGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPPSRP 469


>AB210039-1|BAE06121.1|  856|Homo sapiens DKFZp761D221 variant
           protein protein.
          Length = 856

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 328 PAQGGGRXPXTTPXXTHDXRPPXQXTPXAPNXPXNXPKQPPRXP 459
           P  G G  P TT   +   RP     P     P   P +PP  P
Sbjct: 454 PGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPPSRP 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.304    0.125    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,371,715
Number of Sequences: 237096
Number of extensions: 564495
Number of successful extensions: 1022
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)