Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_A02
         (1113 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    32   0.64 
U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical pr...    30   3.4  
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    29   4.5  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 619 PPXPXPXXTPXTPXRPENPKXRXPTNPHQPXPKKNXXTKPXTP 747
           PP P P   P TP     P  R P  P  P P++     P +P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTP--PSPQRRPPRTPPSP 178



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 610 RXRPPXPXPXXTPXTPXRPENPKXRXPTNPHQPXPKKNXXTKP 738
           R  PP   P   P  P  P +P+ R P  P  P P+    T P
Sbjct: 148 RTPPPRSPPPRRP--PMTPPSPQRRPPRTPPSPEPRNPPRTPP 188


>U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical
           protein F26A1.11 protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 616 RPPXPXPXXTPXTPXRPENPKXRXPTNPHQP 708
           RPP P    +P  P RP   + + P  P QP
Sbjct: 32  RPPRPPRPPSPSRPQRPPPSRPQRPPPPRQP 62


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 31/164 (18%), Positives = 41/164 (25%), Gaps = 2/164 (1%)
 Frame = +1

Query: 253 PXXXXKXPPXPDEREKXXGXRPXXPKXKNPTXPQSGAPXKKPXQXKXXXHNPRPGTQXTX 432
           P    K  P P+ + K        PK  +P       P  KP         P+P  +   
Sbjct: 155 PKLKSKPNPKPEPKPKPKPEPKPKPKP-DPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKP 213

Query: 433 PXNXXXXXXXXXXXXPXTXXRPQPTPXXPXXXXXXXXXXXXXXXXXXXXXXXXXXNKXXR 612
                          P     P P P                              K   
Sbjct: 214 KPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKP 273

Query: 613 XRPPXPXPXXTPXTPXRPEN-PKXRXPTNPH-QPXPKKNXXTKP 738
              P P P   P    +P++ P  R   NP  +P P+     KP
Sbjct: 274 KPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKP 317



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 32/157 (20%), Positives = 42/157 (26%), Gaps = 4/157 (2%)
 Frame = +3

Query: 3   RPPPSGXXXCXPPRRGLXXRKAXPAXXXAPSQRKXHNRXHHXTPAXXGQPPXXXKPRPRX 182
           +P P       P  +     K  P     P  +          P    +P     P P+ 
Sbjct: 180 KPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKP 239

Query: 183 AGPXXKTQPXXQPXP-PXTXXXXXTXPTXXTXTXXR---REGEXXXXEAXXTQTQKPNXA 350
             P  K +P  +P P P T       P        +   +       E       KPN  
Sbjct: 240 E-PKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSR 298

Query: 351 PKWCPPXKTXPXXKXXXQPPAGHPXHXXPXHTXXPTH 461
           PK  P  K  P  K   +P         P H     H
Sbjct: 299 PKPNPRPKPKPRSKPNPKPKPRPKPELKPNHKLKLKH 335


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 26/129 (20%), Positives = 35/129 (27%), Gaps = 6/129 (4%)
 Frame = +3

Query: 111 NRXHHXTPAXXGQPPXXXKPRPRXAGPXXKTQPXXQPXPPXTXXXXXTXPTXXTXTXXRR 290
           N     T A   +P     P P    P    QP   P P          P+       + 
Sbjct: 86  NEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQP 145

Query: 291 EGEXXXXEAXXTQTQKPNXAPKWCP----PXKTXPXXKXXXQPPAG--HPXHXXPXHTXX 452
            G         ++  +P+  P   P    P    P        P+G   P    P     
Sbjct: 146 SGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPS 205

Query: 453 PTHPPXXXP 479
           P+ PP   P
Sbjct: 206 PSGPPSPGP 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.307    0.133    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,930,118
Number of Sequences: 27780
Number of extensions: 149536
Number of successful extensions: 416
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 2994689446
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)